1 | #!/bin/bash
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2 | set -u # NOTE: Do not set -e as it will cause this script to fail when there are errors in underlying Python scripts
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3 |
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4 |
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5 | ## Constants
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6 | #
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7 | VER="3.12.3"
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8 |
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9 | PETSC_DIR="${ISSM_DIR}/externalpackages/petsc/src" # DO NOT CHANGE THIS
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10 | PREFIX="${ISSM_DIR}/externalpackages/petsc/install" # Set to location where external package should be installed
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11 |
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12 | # Download source
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13 | $ISSM_DIR/scripts/DownloadExternalPackage.sh "https://issm.ess.uci.edu/files/externalpackages/petsc-lite-${VER}.tar.gz" "petsc-${VER}.tar.gz"
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14 |
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15 | # Unpack source
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16 | tar -zxvf petsc-${VER}.tar.gz
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17 |
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18 | # Cleanup
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19 | rm -rf ${PREFIX} ${PETSC_DIR}
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20 | mkdir ${PETSC_DIR}
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21 |
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22 | # Move source to $PETSC_DIR
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23 | mv petsc-${VER}/* ${PETSC_DIR}
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24 | rm -rf petsc-${VER}
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25 |
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26 | # Configure
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27 | #
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28 | # - Added -fallow-argument-mismatch option to FFLAGS in order to clear "Error:
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29 | # Rank mismatch between actual argument at [...]"
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30 | # - Added -fallow-invalid-boz option to FFLAGS in order to clear "Error: BOZ
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31 | # literal constant at [...]"
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32 | #
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33 | cd ${PETSC_DIR}
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34 | ./config/configure.py \
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35 | --prefix="${PREFIX}" \
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36 | --PETSC_DIR="${PETSC_DIR}" \
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37 | --FFLAGS="-fallow-argument-mismatch -fallow-invalid-boz" \
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38 | --with-debugging=0 \
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39 | --with-valgrind=0 \
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40 | --with-x=0 \
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41 | --with-ssl=0 \
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42 | --with-pic=1 \
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43 | --with-mpiexec="/c/PROGRA~1/MICROS~1/Bin/mpiexec.exe" \
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44 | --with-mpi-lib="-L${MSMPI_ROOT}/lib -lmsmpi" \
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45 | --with-mpi-include="${MSMPI_ROOT}/include" \
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46 | --with-metis-dir=${METIS_ROOT} \
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47 | --with-parmetis-dir=${PARMETIS_ROOT} \
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48 | --with-blas-lib="-L${BLAS_ROOT}/lib -lblas" \
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49 | --known-64-bit-blas-indices=0 \
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50 | --with-lapack-lib="-L${LAPACK_ROOT}/lib -llapack" \
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51 | --with-scalapack-dir=${SCALAPACK_ROOT} \
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52 | --with-mumps-dir=${MUMPS_ROOT}
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53 |
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54 | # Compile and install
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55 | make
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56 | make install
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57 |
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58 | # NOTE:
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59 | # - Hack to recover from failed installation (appears to happen only on Windows
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60 | # when reproducing symbolic links in destination directory) rather than
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61 | # trying to patch src/config/install.py
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62 | #
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63 | if [ $? -ne 0 ]; then
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64 | make install
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65 | fi
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