1 | #!/bin/bash
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2 |
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3 | #Get number of cpus
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4 | NUMCPUS=$1;
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5 |
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6 | #Some cleanup
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7 | rm -rf Dakota
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8 | rm -rf src
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9 | rm -rf install
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10 | mkdir src install
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11 |
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12 | #Untar
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13 | tar -zxvf Dakota_4_3.src.tar.gz
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14 |
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15 | #Move Dakota to src directory
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16 | mv Dakota/* src
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17 | rm -rf Dakota
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18 |
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19 | #Apply patches
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20 | patch src/src/ParallelLibrary.C ./ParallelLibrary.C.patch
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21 | patch src/src/ParallelLibrary.H ./ParallelLibrary.H.patch
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22 | patch src/src/NIDRProblemDescDB.C ./NIDRProblemDescDB.C.patch
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23 | patch src/src/NonDSampling.C ./NonDSampling.C.patch
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24 | patch src/src/NonDLocalReliability.C ./NonDLocalReliability.C.patch
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25 | patch src/src/NonDUnilevelRBDO.C ./NonDUnilevelRBDO.C.patch # source not even used?
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26 | #patch -R src/packages/Pecos/src/LHSDriver.cpp ./LHSDriver.cpp.patch
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27 |
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28 | #Configure dakota
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29 | cd src
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30 | ./configure \
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31 | --prefix="$ISSM_TIER/externalpackages/dakota/install" \
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32 | --without-graphics \
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33 | --with-pic \
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34 | --disable-mpi \
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35 | --with-blas="-L$ISSM_TIER/externalpackages/petsc/install/lib -lfblas " \
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36 | --with-lapack="-L$ISSM_TIER/externalpackages/petsc/install/lib -lflapack -lPLAPACK "
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37 | cd ..
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38 |
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39 | #Before compiling, if running on 64 bits, we need to active fPIC compilation. Some packages
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40 | #do not register -fPIC in Dakota, which is a problem. Edit the faulty Makefiles and add the -fPIC
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41 | #flag to the compilation.
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42 | cat ./src/methods/NCSUOpt/Makefile | sed 's/FFLAGS = -g -O2/FFLAGS = -g -O2 -fPIC/g' > temp
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43 | mv temp ./src/methods/NCSUOpt/Makefile
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44 |
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45 | cat ./src/methods/acro/packages/pebbl/src/Makefile | sed 's/CXXFLAGS = -O2 -fpermissive/CXXFLAGS = -O2 -fpermissive -fPIC/g' > temp
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46 | mv temp ./src/methods/acro/packages/pebbl/src/Makefile
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47 |
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48 | cat ./src/methods/hopspack/src-nappspack/Makefile | sed 's/CXXFLAGS = -g -O2/CXXFLAGS = -g -O2 -fPIC/g' > temp
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49 | mv temp ./src/methods/hopspack/src-nappspack/Makefile
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50 |
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51 | cat ./src/methods/hopspack/src-cddlib/Makefile | sed 's/CFLAGS = -g -O2/CFLAGS = -g -O2 -fPIC/g' > temp
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52 | mv temp ./src/methods/hopspack/src-cddlib/Makefile
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53 |
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54 | cat ./src/methods/hopspack/src-shared/Makefile | sed 's/CFLAGS = -g -O2/CFLAGS = -g -O2 -fPIC/g' > temp
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55 | mv temp ./src/methods/hopspack/src-shared/Makefile
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56 |
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57 | cat ./src/methods/hopspack/src-shared/Makefile | sed 's/CXXFLAGS = -g -O2/CXXFLAGS = -g -O2 -fPIC/g' > temp
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58 | mv temp ./src/methods/hopspack/src-shared/Makefile
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59 |
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60 | cat ./src/methods/hopspack/src-conveyor/Makefile | sed 's/CXXFLAGS = -g -O2/CXXFLAGS = -g -O2 -fPIC/g' > temp
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61 | mv temp ./src/methods/hopspack/src-conveyor/Makefile
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62 |
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63 | cat ./src/methods/hopspack/src-appspack/Makefile | sed 's/CXXFLAGS = -g -O2/CXXFLAGS = -g -O2 -fPIC/g' > temp
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64 | mv temp ./src/methods/hopspack/src-appspack/Makefile
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65 |
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66 | cat ./src/methods/acro/packages/colin/src/Makefile | sed 's/CXXFLAGS = -O2 -fpermissive/CXXFLAGS = -O2 -fpermissive -fPIC/g' > temp
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67 | mv temp ./src/methods/acro/packages/colin/src/Makefile
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68 |
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69 | cat ./src/methods/acro/packages/coliny/src/Makefile | sed 's/CXXFLAGS = -O2 -fpermissive/CXXFLAGS = -O2 -fpermissive -fPIC/g' > temp
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70 | mv temp ./src/methods/acro/packages/coliny/src/Makefile
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71 |
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72 | cat ./src/methods/acro/packages/tpl/3po/Makefile | sed 's/CFLAGS = -O2/CFLAGS = -O2 -fPIC/g' > temp
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73 | mv temp ./src/methods/acro/packages/tpl/3po/Makefile
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74 |
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75 | cat ./src/methods/acro/packages/tpl/3po/Makefile | sed 's/CXXFLAGS = -O2 -fpermissive/CFLAGS = -O2 -fpermissive -fPIC/g' > temp
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76 | mv temp ./src/methods/acro/packages/tpl/3po/Makefile
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77 |
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78 | cat ./src/packages/ampl/Makefile | sed 's/CFLAGS = -g -O2 -D_NONSTD_SOURCE/CFLAGS = -g -O2 -fPIC/g' > temp
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79 | mv temp ./src/packages/ampl/Makefile
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80 |
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81 | #Compile and install dakota
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82 | cd src
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83 | if [ -z $NUMCPUS ];
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84 | then
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85 | make
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86 | make install
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87 | else
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88 | make -j $NUMCPUS
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89 | make -j $NUMCPUS install
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90 | fi
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91 | cd ..
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92 |
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93 | #Weird behaviour of Dakota: libamplsolver.a and amplsolver.a are not the same thing!
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94 | cd install/lib
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95 | mv libamplsolver.a libamplsolver.a.bak
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96 | ln -s ../../src/packages/ampl/amplsolver.a ./libamplsolver.a
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