#!/bin/sh

./configure --prefix=$ISSM_TIER --with-matlab-dir=$MATLAB_DIR --with-triangle-dir=$ISSM_TIER/externalpackages/triangle/install --with-metis-dir=$ISSM_TIER/externalpackages/metis/install --with-petsc-dir=$ISSM_TIER/externalpackages/petsc/install --with-petsc-version=3 --with-mpi-include=$ISSM_TIER/externalpackages/mpich2/install/include  --with-mpi-lib="-L$ISSM_TIER/externalpackages/mpich2/install/lib/ -lmpich" --with-petsc-arch=$ISSM_ARCH --with-dakota-dir=$ISSM_TIER/externalpackages/dakota/install --with-blas-lapack-dir=$ISSM_TIER/externalpackages/petsc/install --with-plapack-lib="-L $ISSM_TIER/externalpackages/petsc/install/ -lPLAPACK" --with-plapack-include="-I $ISSM_TIER/externalpackages/petsc/install/externalpackages/PLAPACKR32-hg/INCLUDE" --with-blacs-dir=$ISSM_TIER/externalpackages/petsc/install/ --with-scalapack-dir=$ISSM_TIER/externalpackages/petsc/install/ --with-mumps-dir=$ISSM_TIER/externalpackages/petsc/install/ --with-fortran-lib="-L/usr/lib/gcc/x86_64-redhat-linux/4.1.1/ -lgfortran" --with-graphics-lib=/usr/lib64/libX11.so --with-cxxoptflags="-march=opteron -O2" --with-numthreads=32