| 1 | /*!\file: Element.h
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| 2 | * \brief abstract class for Element object
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| 3 | * This class is a place holder for the Tria and the Penta elements.
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| 4 | * It is derived from Element, so DataSets can contain them.
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| 5 | */
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| 6 |
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| 7 | #ifndef _ELEMENT_H_
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| 8 | #define _ELEMENT_H_
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| 9 |
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| 10 | /*Headers:*/
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| 11 | /*{{{*/
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| 12 | #include "../../datastructures/datastructures.h"
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| 13 | #include "../../toolkits/toolkits.h"
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| 14 | #include "../Update.h"
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| 15 | class DataSet;
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| 16 | class Parameters;
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| 17 | class Parameter;
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| 18 | class Elements;
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| 19 | class Loads;
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| 20 | class Nodes;
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| 21 | class Node;
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| 22 | class Vertices;
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| 23 | class Vertex;
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| 24 | class Materials;
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| 25 | class Material;
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| 26 | class Matpar;
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| 27 | class Inputs;
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| 28 | class Input;
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| 29 | class Gauss;
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| 30 | class ElementVector;
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| 31 | template <class doublematrix> class Matrix;
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| 32 | template <class doubletype> class Vector;
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| 33 | class ElementMatrix;
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| 34 | class ElementVector;
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| 35 | /*}}}*/
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| 36 |
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| 37 | class Element: public Object,public Update{
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| 38 |
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| 39 | public:
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| 40 | int id;
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| 41 | int sid;
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| 42 | Inputs *inputs;
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| 43 | Node **nodes;
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| 44 | Vertex **vertices;
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| 45 | Material *material;
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| 46 | Matpar *matpar;
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| 47 | Parameters *parameters;
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| 48 |
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| 49 | int* element_type_list;
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| 50 | int element_type;
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| 51 |
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| 52 | public:
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| 53 | /*Constructors/Destructores*/
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| 54 | Element();
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| 55 | ~Element();
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| 56 |
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| 57 | /*Functions*/
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| 58 | void AddInput(Input* input_in);
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| 59 | /* bool AllActive(void); */
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| 60 | /* bool AnyActive(void); */
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| 61 | void CoordinateSystemTransform(IssmDouble** ptransform,Node** nodes,int numnodes,int* cs_array);
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| 62 | void Echo();
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| 63 | void DeepEcho();
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| 64 | void DeleteMaterials(void);
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| 65 | void dViscositydBSSA(IssmDouble* pdmudB,int dim,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 66 | void dViscositydDSSA(IssmDouble* pdmudB,int dim,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 67 | IssmDouble Divergence(void);
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| 68 | void ThermalToEnthalpy(IssmDouble* penthalpy,IssmDouble temperature,IssmDouble waterfraction,IssmDouble pressure);
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| 69 | void EnthalpyToThermal(IssmDouble* ptemperature,IssmDouble* pwaterfraction,IssmDouble enthalpy,IssmDouble pressure);
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| 70 | IssmDouble EnthalpyDiffusionParameter(IssmDouble enthalpy,IssmDouble pressure);
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| 71 | IssmDouble EnthalpyDiffusionParameterVolume(int numvertices,IssmDouble* enthalpy,IssmDouble* pressure);
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| 72 | void FindParam(bool* pvalue,int paramenum);
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| 73 | void FindParam(int* pvalue,int paramenum);
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| 74 | void FindParam(IssmDouble* pvalue,int paramenum);
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| 75 | void FindParam(int** pvalues,int* psize,int paramenum);
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| 76 | void GetDofList(int** pdoflist,int approximation_enum,int setenum);
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| 77 | void GetDofListVelocity(int** pdoflist,int setenum);
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| 78 | void GetDofListPressure(int** pdoflist,int setenum);
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| 79 | Input* GetInput(int inputenum);
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| 80 | void GetInputListOnNodes(IssmDouble* pvalue,int enumtype);
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| 81 | void GetInputListOnNodes(IssmDouble* pvalue,int enumtype,IssmDouble defaultvalue);
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| 82 | void GetInputListOnNodesVelocity(IssmDouble* pvalue,int enumtype);
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| 83 | void GetInputListOnVertices(IssmDouble* pvalue,int enumtype);
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| 84 | void GetInputListOnVertices(IssmDouble* pvalue,int enumtype,IssmDouble defaultvalue);
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| 85 | void GetInputValue(bool* pvalue,int enum_type);
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| 86 | void GetInputValue(int* pvalue,int enum_type);
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| 87 | void GetInputValue(IssmDouble* pvalue,int enum_type);
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| 88 | void GetInputValue(IssmDouble* pvalue,Gauss* gauss,int enum_type);
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| 89 | IssmDouble GetMaterialParameter(int enum_in);
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| 90 | void GetNodesSidList(int* sidlist);
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| 91 | void GetNodesLidList(int* lidlist);
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| 92 | void GetPhi(IssmDouble* phi, IssmDouble* epsilon, IssmDouble viscosity);
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| 93 | void GetVectorFromInputs(Vector<IssmDouble>* vector, int name_enum);
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| 94 | void GetVertexPidList(int* pidlist);
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| 95 | void GetVerticesCoordinates(IssmDouble** xyz_list);
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| 96 | void GetVerticesSidList(int* sidlist);
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| 97 | void GetVerticesConnectivityList(int* connectivitylist);
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| 98 | IssmDouble GetXcoord(IssmDouble* xyz_list,Gauss* gauss);
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| 99 | IssmDouble GetYcoord(IssmDouble* xyz_list,Gauss* gauss);
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| 100 | IssmDouble GetZcoord(IssmDouble* xyz_list,Gauss* gauss);
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| 101 | void GradientIndexing(int* indexing,int control_index);
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| 102 | bool HasNodeOnBase();
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| 103 | bool HasNodeOnSurface();
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| 104 | int Id();
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| 105 | int Sid();
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| 106 | void InputChangeName(int enum_type,int enum_type_old);
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| 107 | void InputCreate(IssmDouble* vector,IoModel* iomodel,int M,int N,int vector_type,int vector_enum,int code);
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| 108 | void InputDuplicate(int original_enum,int new_enum);
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| 109 | void InputUpdateFromConstant(IssmDouble constant, int name);
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| 110 | void InputUpdateFromConstant(int constant, int name);
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| 111 | void InputUpdateFromConstant(bool constant, int name);
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| 112 | bool IsIceInElement();
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| 113 | bool IsInput(int name);
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| 114 | bool IsFloating();
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| 115 | void LinearFloatingiceMeltingRate();
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| 116 | ElementVector* NewElementVector(int approximation_enum=NoneApproximationEnum);
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| 117 | ElementMatrix* NewElementMatrix(int approximation_enum=NoneApproximationEnum);
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| 118 | ElementMatrix* NewElementMatrixCoupling(int number_nodes,int approximation_enum=NoneApproximationEnum);
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| 119 | IssmDouble PureIceEnthalpy(IssmDouble pressure);
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| 120 | void ResultInterpolation(int* pinterpolation,int*nodesperelement,int output_enum);
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| 121 | void ResultToVector(Vector<IssmDouble>* vector,int output_enum);
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| 122 | void ResultToPatch(IssmDouble* values,int nodesperelement,int output_enum);
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| 123 | void SetwiseNodeConnectivity(int* d_nz,int* o_nz,Node* node,bool* flags,int* flagsindices,int set1_enum,int set2_enum);
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| 124 | void StrainRateSSA(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 125 | void StrainRateSSA1d(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input);
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| 126 | void StrainRateHO(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 127 | void StrainRateHO2dvertical(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 128 | void StrainRateFS(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input);
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| 129 | IssmDouble TMeltingPoint(IssmDouble pressure);
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| 130 | void TransformInvStiffnessMatrixCoord(ElementMatrix* Ke,int cs_enum);
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| 131 | void TransformInvStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes,int numnodes,int cs_enum);
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| 132 | void TransformInvStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes,int numnodes,int* cs_array);
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| 133 | void TransformLoadVectorCoord(ElementVector* pe,int cs_enum);
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| 134 | void TransformLoadVectorCoord(ElementVector* pe,int* cs_array);
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| 135 | void TransformLoadVectorCoord(ElementVector* pe,Node** nodes,int numnodes,int cs_enum);
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| 136 | void TransformLoadVectorCoord(ElementVector* pe,Node** nodes,int numnodes,int* cs_array);
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| 137 | void TransformSolutionCoord(IssmDouble* solution,int cs_enum);
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| 138 | void TransformSolutionCoord(IssmDouble* solution,int* cs_array);
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| 139 | void TransformSolutionCoord(IssmDouble* solution,int numnodes,int cs_enum);
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| 140 | void TransformSolutionCoord(IssmDouble* solution,int numnodes,int* cs_array);
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| 141 | void TransformSolutionCoord(IssmDouble* solution,Node** nodes,int numnodes,int cs_enum);
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| 142 | void TransformSolutionCoord(IssmDouble* solution,Node** nodes,int numnodes,int* cs_array);
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| 143 | void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int cs_enum);
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| 144 | void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int* cs_array);
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| 145 | void TransformStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes,int numnodes,int cs_enum);
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| 146 | void TransformStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes,int numnodes,int* cs_array);
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| 147 | void ViscousHeatingCreateInput(void);
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| 148 | void ViscosityFS(IssmDouble* pviscosity,int dim,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input);
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| 149 | void ViscosityHO(IssmDouble* pviscosity,int dim,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 150 | void ViscosityL1L2(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* surf);
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| 151 | void ViscositySSA(IssmDouble* pviscosity,int dim,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
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| 152 | void ViscositySSADerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
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| 153 | void ViscosityHODerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
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| 154 | void ViscosityFSDerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
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| 155 | void TransformLoadVectorCoord(ElementVector* pe,int numnodes,int transformenum){_error_("not implemented yet");};/*Tiling only*/
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| 156 | void TransformLoadVectorCoord(ElementVector* pe,int numnodes,int* transformenum_list){_error_("not implemented yet");};/*Tiling only*/
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| 157 | void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int numnodes,int* transformenum_list){_error_("not implemented yet");};/*Tiling only*/
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| 158 |
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| 159 | /*Virtual functions*/
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| 160 | virtual void AddBasalInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
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| 161 | virtual void AddInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
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| 162 | virtual IssmDouble CharacteristicLength(void)=0;
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| 163 | virtual void Configure(Elements* elements,Loads* loads,Nodes* nodes,Vertices* vertices,Materials* materials,Parameters* parameters)=0;
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| 164 | virtual void SetCurrentConfiguration(Elements* elements,Loads* loads,Nodes* nodes,Materials* materials,Parameters* parameters)=0;
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| 165 | virtual void ElementSizes(IssmDouble* phx,IssmDouble* phy,IssmDouble* phz)=0;
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| 166 |
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| 167 | virtual int FiniteElement(void)=0;
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| 168 | virtual IssmDouble MinEdgeLength(IssmDouble* xyz_list)=0;
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| 169 | virtual void NodalFunctions(IssmDouble* basis,Gauss* gauss)=0;
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| 170 | virtual void NodalFunctionsP1(IssmDouble* basis,Gauss* gauss)=0;
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| 171 | virtual void NodalFunctionsVelocity(IssmDouble* basis, Gauss* gauss)=0;
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| 172 | virtual void NodalFunctionsPressure(IssmDouble* basis, Gauss* gauss)=0;
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| 173 | virtual void NodalFunctionsTensor(IssmDouble* basis, Gauss* gauss)=0;
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| 174 | virtual void NodalFunctionsDerivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
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| 175 | virtual void NodalFunctionsP1Derivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
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| 176 | virtual void NodalFunctionsMINIDerivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
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| 177 | virtual void NodalFunctionsDerivativesVelocity(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
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| 178 | virtual void NormalSection(IssmDouble* normal,IssmDouble* xyz_list)=0;
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| 179 | virtual void NormalTop(IssmDouble* normal,IssmDouble* xyz_list)=0;
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| 180 | virtual void NormalBase(IssmDouble* normal,IssmDouble* xyz_list)=0;
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| 181 |
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| 182 | virtual Element* GetUpperElement(void)=0;
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| 183 | virtual Element* GetBasalElement(void)=0;
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| 184 |
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| 185 | virtual void JacobianDeterminant(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
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| 186 | virtual void JacobianDeterminantLine(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
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| 187 | virtual void JacobianDeterminantSurface(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
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| 188 | virtual void JacobianDeterminantBase(IssmDouble* Jdet,IssmDouble* xyz_list_base,Gauss* gauss)=0;
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| 189 | virtual void JacobianDeterminantTop(IssmDouble* Jdet,IssmDouble* xyz_list_base,Gauss* gauss)=0;
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| 190 | virtual void GetSolutionFromInputsOneDof(Vector<IssmDouble>* solution,int solutionenum)=0;
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| 191 | virtual int GetNodeIndex(Node* node)=0;
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| 192 | virtual int GetNumberOfNodes(void)=0;
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| 193 | virtual int GetNumberOfVertices(void)=0;
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| 194 |
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| 195 | virtual bool IsNodeOnShelfFromFlags(IssmDouble* flags)=0;
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| 196 | virtual bool IsOnBase()=0;
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| 197 | virtual bool IsOnSurface()=0;
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| 198 | virtual void GetGroundedPart(int* point1,IssmDouble* fraction1,IssmDouble* fraction2, bool* mainlyfloating)=0;
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| 199 | virtual IssmDouble GetGroundedPortion(IssmDouble* xyz_list)=0;
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| 200 | virtual void GetInputValue(IssmDouble* pvalue,Node* node,int enumtype)=0;
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| 201 | virtual Node* GetNode(int node_number)=0;
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| 202 | virtual void GetVerticesCoordinatesBase(IssmDouble** xyz_list)=0;
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| 203 | virtual void GetVerticesCoordinatesTop(IssmDouble** xyz_list)=0;
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| 204 |
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| 205 | virtual int GetElementType(void)=0;
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| 206 |
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| 207 | virtual IssmDouble SurfaceArea(void)=0;
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| 208 | virtual void InputDepthAverageAtBase(int enum_type,int average_enum_type)=0;
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| 209 | virtual void ComputeSigmaNN(void)=0;
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| 210 | virtual void ComputeBasalStress(Vector<IssmDouble>* sigma_b)=0;
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| 211 | virtual void ComputeStrainRate()=0;
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| 212 | virtual void ComputeStrainRate(Vector<IssmDouble>* eps)=0;
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| 213 | virtual void ComputeStressTensor(void)=0;
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| 214 | virtual void ComputeDeviatoricStressTensor(void)=0;
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| 215 |
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| 216 | virtual void Update(int index, IoModel* iomodel,int analysis_counter,int analysis_type,int finite_element)=0;
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| 217 | virtual void InputExtrude(int input_enum)=0;
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| 218 | virtual void InputUpdateFromSolutionOneDofCollapsed(IssmDouble* solution,int inputenum)=0;
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| 219 | virtual void InputUpdateFromSolutionOneDof(IssmDouble* solution,int inputenum)=0;
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| 220 |
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| 221 | virtual int NodalValue(IssmDouble* pvalue, int index, int natureofdataenum)=0;
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| 222 | virtual int NumberofNodesVelocity(void)=0;
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| 223 | virtual int NumberofNodesPressure(void)=0;
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| 224 | virtual Gauss* NewGauss(void)=0;
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| 225 | virtual Gauss* NewGauss(int order)=0;
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| 226 | virtual Gauss* NewGauss(IssmDouble* xyz_list, IssmDouble* xyz_list_front,int order)=0;
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| 227 | virtual Gauss* NewGauss(IssmDouble* xyz_list, IssmDouble* xyz_list_front,int order_horiz,int order_vert)=0;
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| 228 | virtual Gauss* NewGauss(int point1,IssmDouble fraction1,IssmDouble fraction2,bool mainlyfloating,int order)=0;
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| 229 | virtual Gauss* NewGaussBase(int order)=0;
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| 230 | virtual Gauss* NewGaussLine(int vertex1,int vertex2,int order)=0;
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| 231 | virtual Gauss* NewGaussTop(int order)=0;
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| 232 |
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| 233 | virtual void InputScale(int enum_type,IssmDouble scale_factor)=0;
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| 234 | virtual IssmDouble TimeAdapt()=0;
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| 235 | virtual void PositiveDegreeDay(IssmDouble* pdds,IssmDouble* pds,IssmDouble signorm)=0;
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| 236 | virtual void Delta18oParameterization(void)=0;
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| 237 | virtual Element* SpawnBasalElement(void)=0;
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| 238 | virtual Element* SpawnTopElement(void)=0;
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| 239 | virtual void ReduceMatrices(ElementMatrix* Ke,ElementVector* pe)=0;
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| 240 | virtual void ResetFSBasalBoundaryCondition()=0;
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| 241 | virtual void SetTemporaryElementType(int element_type_in)=0;
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| 242 | virtual IssmDouble StabilizationParameter(IssmDouble u, IssmDouble v, IssmDouble w, IssmDouble diameter, IssmDouble kappa)=0;
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| 243 | virtual void ValueP1OnGauss(IssmDouble* pvalue,IssmDouble* values,Gauss* gauss)=0;
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| 244 | virtual void ValueP1DerivativesOnGauss(IssmDouble* dvalue,IssmDouble* values,IssmDouble* xyz_list,Gauss* gauss)=0;
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| 245 | virtual void ViscousHeating(IssmDouble* pphi,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input)=0;
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| 246 |
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| 247 | virtual int VelocityInterpolation()=0;
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| 248 | virtual int PressureInterpolation()=0;
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| 249 | virtual int TensorInterpolation()=0;
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| 250 | virtual bool IsZeroLevelset(int levelset_enum)=0;
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| 251 | virtual bool IsIcefront(void)=0;
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| 252 | virtual bool IsFaceOnBoundary(void)=0;
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| 253 | virtual void ZeroLevelsetCoordinates(IssmDouble** pxyz_zero,IssmDouble* xyz_list,int levelsetenum)=0;
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| 254 | virtual void GetIcefrontCoordinates(IssmDouble** pxyz_front,IssmDouble* xyz_list,int levelsetenum)=0;
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| 255 |
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| 256 | virtual void AverageOntoPartition(Vector<IssmDouble>* partition_contributions,Vector<IssmDouble>* partition_areas,IssmDouble* vertex_response,IssmDouble* qmu_part)=0;
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| 257 | virtual void MinVel(IssmDouble* pminvel)=0;
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| 258 | virtual void MaxVel(IssmDouble* pmaxvel)=0;
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| 259 | virtual void MinVx(IssmDouble* pminvx)=0;
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| 260 | virtual void MaxVx(IssmDouble* pmaxvx)=0;
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| 261 | virtual void MaxAbsVx(IssmDouble* pmaxabsvx)=0;
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| 262 | virtual void MinVy(IssmDouble* pminvy)=0;
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| 263 | virtual void MaxVy(IssmDouble* pmaxvy)=0;
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| 264 | virtual void MaxAbsVy(IssmDouble* pmaxabsvy)=0;
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| 265 | virtual void MinVz(IssmDouble* pminvz)=0;
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| 266 | virtual void MaxVz(IssmDouble* pmaxvz)=0;
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| 267 | virtual void MaxAbsVz(IssmDouble* pmaxabsvz)=0;
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| 268 | virtual IssmDouble MassFlux(IssmDouble* segment)=0;
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| 269 | virtual IssmDouble MassFlux(IssmDouble x1,IssmDouble y1, IssmDouble x2, IssmDouble y2,int segment_id)=0;
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| 270 | virtual void ElementResponse(IssmDouble* presponse,int response_enum)=0;
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| 271 | virtual IssmDouble IceVolume(void)=0;
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| 272 | virtual IssmDouble IceVolumeAboveFloatation(void)=0;
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| 273 | virtual IssmDouble TotalSmb(void)=0;
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| 274 | virtual IssmDouble Misfit(int modelenum,int observationenum,int weightsenum)=0;
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| 275 | virtual IssmDouble MisfitArea(int weightsenum)=0;
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| 276 | virtual int VertexConnectivity(int vertexindex)=0;
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| 277 | virtual void VerticalSegmentIndices(int** pindices,int* pnumseg)=0;
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| 278 |
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| 279 | #ifdef _HAVE_GIA_
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| 280 | virtual void GiaDeflection(Vector<IssmDouble>* wg,Vector<IssmDouble>* dwgdt,IssmDouble* x,IssmDouble* y)=0;
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| 281 | #endif
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| 282 |
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| 283 | virtual void ControlInputGetGradient(Vector<IssmDouble>* gradient,int enum_type,int control_index)=0;
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| 284 | virtual void ControlInputSetGradient(IssmDouble* gradient,int enum_type,int control_index)=0;
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| 285 | virtual void ControlInputScaleGradient(int enum_type, IssmDouble scale)=0;
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| 286 | virtual void ControlToVectors(Vector<IssmPDouble>* vector_control, Vector<IssmPDouble>* vector_gradient,int control_enum)=0;
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| 287 | virtual void GetVectorFromControlInputs(Vector<IssmDouble>* gradient,int control_enum,int control_index,const char* data)=0;
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| 288 | virtual void SetControlInputsFromVector(IssmDouble* vector,int control_enum,int control_index)=0;
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| 289 | virtual void InputControlUpdate(IssmDouble scalar,bool save_parameter)=0;
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| 290 |
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| 291 | virtual void UpdateConstraintsExtrudeFromBase(void)=0;
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| 292 | virtual void UpdateConstraintsExtrudeFromTop(void)=0;
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| 293 |
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| 294 | virtual void MigrateGroundingLine(IssmDouble* sheet_ungrounding)=0;
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| 295 | virtual void FSContactMigration(Vector<IssmDouble>* vertexgrounded,Vector<IssmDouble>* vertexfloating)=0;
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| 296 | virtual void PotentialUngrounding(Vector<IssmDouble>* potential_sheet_ungrounding)=0;
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| 297 | virtual int UpdatePotentialUngrounding(IssmDouble* potential_sheet_ungrounding,Vector<IssmDouble>* vec_nodes_on_iceshelf,IssmDouble* nodes_on_iceshelf)=0;
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| 298 |
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| 299 | };
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| 300 | #endif
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