source: issm/trunk-jpl/src/c/classes/Elements/Element.h@ 17001

Last change on this file since 17001 was 17001, checked in by Mathieu Morlighem, 11 years ago

CHG: moving DVector to analysis
File size: 16.6 KB
RevLine 
[3683]1/*!\file: Element.h
2 * \brief abstract class for Element object
3 * This class is a place holder for the Tria and the Penta elements.
4 * It is derived from Element, so DataSets can contain them.
5 */
6
7#ifndef _ELEMENT_H_
8#define _ELEMENT_H_
9
10/*Headers:*/
[12365]11/*{{{*/
[15067]12#include "../../datastructures/datastructures.h"
[16789]13#include "../../toolkits/toolkits.h"
[15012]14#include "../Update.h"
[3683]15class DataSet;
16class Parameters;
[16912]17class Parameter;
[14996]18class Elements;
19class Loads;
[16912]20class Nodes;
[14996]21class Node;
22class Vertices;
[16912]23class Vertex;
[14996]24class Materials;
[16912]25class Material;
[16693]26class Matpar;
[16912]27class Inputs;
[16675]28class Input;
29class Gauss;
[16799]30class ElementVector;
[13216]31template <class doublematrix> class Matrix;
32template <class doubletype> class Vector;
[16789]33class ElementMatrix;
34class ElementVector;
[3683]35/*}}}*/
36
[4244]37class Element: public Object,public Update{
[3683]38
[16910]39 public:
[16912]40 Inputs *inputs;
41 Node **nodes;
42 Vertex **vertices;
43 Material *material;
44 Matpar *matpar;
45 Parameters *parameters;
[16910]46
[3683]47 public:
[16910]48 /*Constructors/Destructores*/
49 Element();
50 ~Element();
[13623]51
[16910]52 /*Functions*/
[16913]53 void AddInput(Input* input_in);
54 bool AllActive(void);
55 bool AnyActive(void);
56 void DeleteMaterials(void);
57 void FindParam(bool* pvalue,int paramenum);
58 void FindParam(int* pvalue,int paramenum);
59 void FindParam(IssmDouble* pvalue,int paramenum);
60 void FindParam(int** pvalues,int* psize,int paramenum);
61 Input* GetInput(int inputenum);
62 IssmDouble GetMaterialParameter(int enum_in);
[16947]63 void GetPhi(IssmDouble* phi, IssmDouble* epsilon, IssmDouble viscosity);
64 void GetVerticesSidList(int* sidlist);
65 void GetVerticesConnectivityList(int* connectivitylist);
[16913]66 bool IsFloating();
[16947]67 void ResultInterpolation(int* pinterpolation,int output_enum);
68 void ResultToVector(Vector<IssmDouble>* vector,int output_enum);
[16915]69 void StrainRateSSA(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
70 void StrainRateHO(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
71 void StrainRateFS(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input);
[16914]72 IssmDouble TMeltingPoint(IssmDouble pressure);
[16947]73 void ViscousHeatingCreateInput(void);
[16922]74 void ViscosityFS(IssmDouble* pviscosity,int dim,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input);
[16915]75 void ViscosityHO(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
76 void ViscosityL1L2(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* surf);
77 void ViscositySSA(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
78 void ViscositySSADerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
79 void ViscosityHODerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
80 void ViscosityFSDerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
[16936]81 void TransformInvStiffnessMatrixCoord(ElementMatrix* Ke,int transformenum);
82 void TransformInvStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes_list,int numnodes,int* transformenum_list);
[16916]83 void TransformLoadVectorCoord(ElementVector* pe,int transformenum);
84 void TransformLoadVectorCoord(ElementVector* pe,int* transformenum_list);
[16947]85 void TransformLoadVectorCoord(ElementVector* pe,int numnodes,int transformenum){_error_("not implemented yet");};/*Tiling only*/
86 void TransformLoadVectorCoord(ElementVector* pe,int numnodes,int* transformenum_list){_error_("not implemented yet");};/*Tiling only*/
[16926]87 void TransformLoadVectorCoord(ElementVector* pe,Node** nodes_list,int numnodes,int* transformenum_list);
[16916]88 void TransformSolutionCoord(IssmDouble* values,int transformenum);
89 void TransformSolutionCoord(IssmDouble* values,int* transformenum_list);
90 void TransformSolutionCoord(IssmDouble* values,int numnodes,int transformenum);
91 void TransformSolutionCoord(IssmDouble* values,int numnodes,int* transformenum_list);
92 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int transformenum);
93 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int* transformenum_list);
94 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int numnodes,int transformenum);
[16947]95 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int numnodes,int* transformenum_list){_error_("not implemented yet");};/*Tiling only*/
[16916]96 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes_list,int numnodes,int* transformenum_list);
[13623]97
[16910]98 /*Virtual functions*/
[16912]99 virtual void AddBasalInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
100 virtual void AddInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
101 virtual void AddMaterialInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
[16832]102 virtual IssmDouble CharacteristicLength(void)=0;
[16912]103 virtual void Configure(Elements* elements,Loads* loads,Nodes* nodes,Vertices* vertices,Materials* materials,Parameters* parameters)=0;
104 virtual void SetCurrentConfiguration(Elements* elements,Loads* loads,Nodes* nodes,Materials* materials,Parameters* parameters)=0;
105 virtual void SetwiseNodeConnectivity(int* d_nz,int* o_nz,Node* node,bool* flags,int* flagsindices,int set1_enum,int set2_enum)=0;
[16840]106 virtual void ElementSizes(IssmDouble* phx,IssmDouble* phy,IssmDouble* phz)=0;
[16734]107 virtual void EnthalpyToThermal(IssmDouble* ptemperature,IssmDouble* pwaterfraction,IssmDouble enthalpy,IssmDouble pressure)=0;
[16812]108 virtual IssmDouble EnthalpyDiffusionParameter(IssmDouble enthalpy,IssmDouble pressure)=0;
109 virtual IssmDouble EnthalpyDiffusionParameterVolume(int numvertices,IssmDouble* enthalpy,IssmDouble* pressure)=0;
[16675]110 virtual int FiniteElement(void)=0;
[16810]111 virtual IssmDouble MinEdgeLength(IssmDouble* xyz_list)=0;
[16799]112 virtual void NodalFunctions(IssmDouble* basis,Gauss* gauss)=0;
[16926]113 virtual void NodalFunctionsP1(IssmDouble* basis,Gauss* gauss)=0;
[16831]114 virtual void NodalFunctionsVelocity(IssmDouble* basis, Gauss* gauss)=0;
115 virtual void NodalFunctionsPressure(IssmDouble* basis, Gauss* gauss)=0;
[16810]116 virtual void NodalFunctionsDerivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
[16926]117 virtual void NodalFunctionsP1Derivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
[16949]118 virtual void NodalFunctionsMINIDerivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
[16831]119 virtual void NodalFunctionsDerivativesVelocity(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
[16839]120 virtual void NormalSection(IssmDouble* normal,IssmDouble* xyz_list)=0;
[16827]121 virtual void NormalTop(IssmDouble* normal,IssmDouble* xyz_list)=0;
[16844]122 virtual void NormalBase(IssmDouble* normal,IssmDouble* xyz_list)=0;
[16813]123 virtual IssmDouble PureIceEnthalpy(IssmDouble pressure)=0;
[16916]124
[16762]125 virtual Element* GetBasalElement(void)=0;
[16675]126 virtual void GetDofList(int** pdoflist,int approximation_enum,int setenum)=0;
127 virtual void GetDofListVelocity(int** pdoflist,int setenum)=0;
128 virtual void GetDofListPressure(int** pdoflist,int setenum)=0;
[16799]129 virtual void JacobianDeterminant(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
[16850]130 virtual void JacobianDeterminantLine(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
[16838]131 virtual void JacobianDeterminantSurface(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
[16803]132 virtual void JacobianDeterminantBase(IssmDouble* Jdet,IssmDouble* xyz_list_base,Gauss* gauss)=0;
[16827]133 virtual void JacobianDeterminantTop(IssmDouble* Jdet,IssmDouble* xyz_list_base,Gauss* gauss)=0;
[16675]134 virtual void GetSolutionFromInputsOneDof(Vector<IssmDouble>* solution,int solutionenum)=0;
[5719]135 virtual int GetNodeIndex(Node* node)=0;
[13886]136 virtual int GetNumberOfNodes(void)=0;
[16715]137 virtual int GetNumberOfNodesVelocity(void)=0;
138 virtual int GetNumberOfNodesPressure(void)=0;
[16727]139 virtual int GetNumberOfVertices(void)=0;
[13892]140 virtual void GetNodesSidList(int* sidlist)=0;
[16042]141 virtual void GetNodesLidList(int* sidlist)=0;
[13892]142
[7089]143 virtual int Sid()=0;
[12471]144 virtual bool IsNodeOnShelfFromFlags(IssmDouble* flags)=0;
[5745]145 virtual bool IsOnBed()=0;
[16827]146 virtual bool IsOnSurface()=0;
[16872]147 virtual void GetGroundedPart(int* point1,IssmDouble* fraction1,IssmDouble* fraction2, bool* mainlyfloating)=0;
148 virtual IssmDouble GetGroundedPortion(IssmDouble* xyz_list)=0;
[16693]149 virtual void GetInputListOnNodes(IssmDouble* pvalue,int enumtype)=0;
150 virtual void GetInputListOnNodes(IssmDouble* pvalue,int enumtype,IssmDouble defaultvalue)=0;
[12471]151 virtual void GetInputListOnVertices(IssmDouble* pvalue,int enumtype)=0;
152 virtual void GetInputListOnVertices(IssmDouble* pvalue,int enumtype,IssmDouble defaultvalue)=0;
[16848]153 virtual Input* GetMaterialInput(int inputenum)=0;
[12471]154 virtual void GetInputValue(IssmDouble* pvalue,Node* node,int enumtype)=0;
[16675]155 virtual void GetInputValue(bool* pvalue,int enum_type)=0;
156 virtual void GetInputValue(int* pvalue,int enum_type)=0;
157 virtual void GetInputValue(IssmDouble* pvalue,int enum_type)=0;
[16873]158 virtual void GetInputValue(IssmDouble* pvalue,Gauss* gauss,int enum_type)=0;
[16907]159 virtual Node* GetNode(int node_number)=0;
[16698]160 virtual void GetVerticesCoordinates(IssmDouble** xyz_list)=0;
[16803]161 virtual void GetVerticesCoordinatesBase(IssmDouble** xyz_list)=0;
[16827]162 virtual void GetVerticesCoordinatesTop(IssmDouble** xyz_list)=0;
[16839]163 virtual IssmDouble GetZcoord(Gauss* gauss)=0;
[16866]164 virtual IssmDouble GetYcoord(Gauss* gauss)=0;
[16188]165 virtual void GetMaterialInputValue(IssmDouble* pvalue,Node* node,int enumtype)=0;
[13623]166
[12471]167 virtual IssmDouble SurfaceArea(void)=0;
[4931]168 virtual void InputDepthAverageAtBase(int enum_type,int average_enum_type,int object_enum)=0;
[16693]169 virtual void InputChangeName(int enum_type,int enum_type_old)=0;
[13216]170 virtual void ComputeBasalStress(Vector<IssmDouble>* sigma_b)=0;
171 virtual void ComputeStrainRate(Vector<IssmDouble>* eps)=0;
[16848]172 virtual void ComputeStressTensor(void)=0;
[16947]173
[15613]174 virtual void Update(int index, IoModel* iomodel,int analysis_counter,int analysis_type,int finite_element)=0;
[8967]175 virtual void InputDuplicate(int original_enum,int new_enum)=0;
[16208]176 virtual void InputCreate(IssmDouble* vector,IoModel* iomodel,int M,int N,int vector_type,int vector_enum,int code)=0;
[16715]177 virtual void InputUpdateFromSolutionOneDofCollapsed(IssmDouble* solution,int inputenum)=0;
[16717]178 virtual void InputUpdateFromSolutionOneDof(IssmDouble* solution,int inputenum)=0;
[13623]179
[15130]180 virtual int NodalValue(IssmDouble* pvalue, int index, int natureofdataenum)=0;
[16675]181 virtual int NumberofNodesVelocity(void)=0;
182 virtual int NumberofNodesPressure(void)=0;
183 virtual Gauss* NewGauss(void)=0;
[16799]184 virtual Gauss* NewGauss(int order)=0;
[16838]185 virtual Gauss* NewGauss(IssmDouble* xyz_list, IssmDouble* xyz_list_front,int order)=0;
[16839]186 virtual Gauss* NewGauss(IssmDouble* xyz_list, IssmDouble* xyz_list_front,int order_horiz,int order_vert)=0;
[16872]187 virtual Gauss* NewGauss(int point1,IssmDouble fraction1,IssmDouble fraction2,bool mainlyfloating,int order)=0;
[16803]188 virtual Gauss* NewGaussBase(int order)=0;
[16850]189 virtual Gauss* NewGaussLine(int vertex1,int vertex2,int order)=0;
[16827]190 virtual Gauss* NewGaussTop(int order)=0;
[16803]191 virtual ElementVector* NewElementVector(int approximation_enum=NoneApproximationEnum)=0;
[16818]192 virtual ElementMatrix* NewElementMatrix(int approximation_enum=NoneApproximationEnum)=0;
[16956]193 virtual ElementMatrix* NewElementMatrixCoupling(int number_nodes,int approximation_enum=NoneApproximationEnum)=0;
[12471]194 virtual void InputScale(int enum_type,IssmDouble scale_factor)=0;
[13216]195 virtual void GetVectorFromInputs(Vector<IssmDouble>* vector, int name_enum)=0;
[12471]196 virtual IssmDouble TimeAdapt()=0;
197 virtual void PositiveDegreeDay(IssmDouble* pdds,IssmDouble* pds,IssmDouble signorm)=0;
[12748]198 virtual void Delta18oParameterization(void)=0;
[16721]199 virtual void SmbGradients(void)=0;
200 virtual Element* SpawnBasalElement(void)=0;
[16789]201 virtual void ReduceMatrices(ElementMatrix* Ke,ElementVector* pe)=0;
[10440]202 virtual void ResetCoordinateSystem()=0;
[16926]203 virtual void SetTemporaryElementType(int element_type_in)=0;
[16810]204 virtual IssmDouble StabilizationParameter(IssmDouble u, IssmDouble v, IssmDouble w, IssmDouble diameter, IssmDouble kappa)=0;
[16860]205 virtual void ValueP1OnGauss(IssmDouble* pvalue,IssmDouble* values,Gauss* gauss)=0;
206 virtual void ValueP1DerivativesOnGauss(IssmDouble* dvalue,IssmDouble* values,IssmDouble* xyz_list,Gauss* gauss)=0;
[16810]207 virtual void ViscousHeating(IssmDouble* pphi,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input)=0;
[16915]208
[16675]209 virtual int VelocityInterpolation()=0;
210 virtual int PressureInterpolation()=0;
[16833]211 virtual bool IsZeroLevelset(int levelset_enum)=0;
[16838]212 virtual void ZeroLevelsetCoordinates(IssmDouble** pxyz_zero,IssmDouble* xyz_list,int levelsetenum)=0;
[9817]213
214 #ifdef _HAVE_RESPONSES_
[15387]215 virtual void AverageOntoPartition(Vector<IssmDouble>* partition_contributions,Vector<IssmDouble>* partition_areas,IssmDouble* vertex_response,IssmDouble* qmu_part)=0;
[15130]216 virtual void MinVel(IssmDouble* pminvel)=0;
217 virtual void MaxVel(IssmDouble* pmaxvel)=0;
218 virtual void MinVx(IssmDouble* pminvx)=0;
219 virtual void MaxVx(IssmDouble* pmaxvx)=0;
220 virtual void MaxAbsVx(IssmDouble* pmaxabsvx)=0;
221 virtual void MinVy(IssmDouble* pminvy)=0;
222 virtual void MaxVy(IssmDouble* pmaxvy)=0;
223 virtual void MaxAbsVy(IssmDouble* pmaxabsvy)=0;
224 virtual void MinVz(IssmDouble* pminvz)=0;
225 virtual void MaxVz(IssmDouble* pmaxvz)=0;
226 virtual void MaxAbsVz(IssmDouble* pmaxabsvz)=0;
227 virtual IssmDouble MassFlux(IssmDouble* segment)=0;
[16388]228 virtual IssmDouble MassFlux(IssmDouble x1,IssmDouble y1, IssmDouble x2, IssmDouble y2,int segment_id)=0;
[15129]229 virtual void ElementResponse(IssmDouble* presponse,int response_enum)=0;
[12471]230 virtual IssmDouble IceVolume(void)=0;
[16275]231 virtual IssmDouble IceVolumeAboveFloatation(void)=0;
[12773]232 virtual IssmDouble TotalSmb(void)=0;
[16787]233 virtual IssmDouble Misfit(int modelenum,int observationenum,int weightsenum)=0;
[16849]234 virtual int VertexConnectivity(int vertexindex)=0;
[16850]235 virtual void VerticalSegmentIndices(int** pindices,int* pnumseg)=0;
[9817]236 #endif
[4055]237
[14589]238 #ifdef _HAVE_GIA_
[14807]239 virtual void GiaDeflection(Vector<IssmDouble>* wg,Vector<IssmDouble>* dwgdt,IssmDouble* x,IssmDouble* y)=0;
[14589]240 #endif
241
[9817]242 #ifdef _HAVE_CONTROL_
[13216]243 virtual void Gradj(Vector<IssmDouble>* gradient,int control_type,int control_index)=0;
[16314]244 virtual IssmDouble ThicknessAbsMisfit(void)=0;
245 virtual IssmDouble SurfaceAbsVelMisfit(void)=0;
246 virtual IssmDouble SurfaceRelVelMisfit(void)=0;
247 virtual IssmDouble SurfaceLogVelMisfit(void)=0;
248 virtual IssmDouble SurfaceLogVxVyMisfit(void)=0;
249 virtual IssmDouble SurfaceAverageVelMisfit(void)=0;
250 virtual IssmDouble ThicknessAbsGradient(void)=0;
251 virtual IssmDouble ThicknessAlongGradient(void)=0;
252 virtual IssmDouble ThicknessAcrossGradient(void)=0;
253 virtual IssmDouble BalancethicknessMisfit(void)=0;
254 virtual IssmDouble RheologyBbarAbsGradient(void)=0;
255 virtual IssmDouble DragCoefficientAbsGradient(void)=0;
[13216]256 virtual void ControlInputGetGradient(Vector<IssmDouble>* gradient,int enum_type,int control_index)=0;
[12471]257 virtual void ControlInputSetGradient(IssmDouble* gradient,int enum_type,int control_index)=0;
258 virtual void ControlInputScaleGradient(int enum_type, IssmDouble scale)=0;
[16494]259 virtual void ControlToVectors(Vector<IssmPDouble>* vector_control, Vector<IssmPDouble>* vector_gradient,int control_enum)=0;
[13216]260 virtual void GetVectorFromControlInputs(Vector<IssmDouble>* gradient,int control_enum,int control_index,const char* data)=0;
[12471]261 virtual void SetControlInputsFromVector(IssmDouble* vector,int control_enum,int control_index)=0;
262 virtual void InputControlUpdate(IssmDouble scalar,bool save_parameter)=0;
[9817]263 #endif
[14796]264
[16442]265 virtual void UpdateConstraintsExtrudeFromBase(void)=0;
266 virtual void UpdateConstraintsExtrudeFromTop(void)=0;
267
[15853]268 #ifdef _HAVE_THERMAL_
[16272]269 virtual void UpdateBasalConstraintsEnthalpy(void)=0;
[16026]270 virtual void ComputeBasalMeltingrate(void)=0;
[16816]271 virtual void DrainWaterfraction(IssmDouble* drainrate_element)=0;
[15853]272 #endif
273
[14796]274 #ifdef _HAVE_HYDROLOGY_
[16954]275 virtual void GetHydrologyDCInefficientHmax(IssmDouble* ph_max,int index)=0;
[14967]276 virtual void GetHydrologyDCInefficientHmax(IssmDouble* ph_max, Node* innode)=0;
[15015]277 virtual void GetHydrologyTransfer(Vector<IssmDouble>* transfer)=0;
[15249]278 virtual void HydrologyEPLGetMask(Vector<IssmDouble>* mask)=0;
279 virtual void HydrologyEPLGetActive(Vector<IssmDouble>* active)=0;
[16600]280 virtual void ComputeEPLThickness(void)=0;
[14796]281 #endif
[15643]282
[15386]283 #ifdef _HAVE_GROUNDINGLINE_
[15962]284 virtual void MigrateGroundingLine(IssmDouble* sheet_ungrounding)=0;
[15386]285 virtual void PotentialUngrounding(Vector<IssmDouble>* potential_sheet_ungrounding)=0;
286 virtual int UpdatePotentialUngrounding(IssmDouble* potential_sheet_ungrounding,Vector<IssmDouble>* vec_nodes_on_iceshelf,IssmDouble* nodes_on_iceshelf)=0;
287 #endif
288
[3683]289};
290#endif
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