source: issm/trunk-jpl/src/c/classes/Elements/Element.h@ 16916

Last change on this file since 16916 was 16916, checked in by Mathieu Morlighem, 11 years ago

CHG: moved more stuff from Tria to Element.cpp
File size: 15.8 KB
RevLine 
[3683]1/*!\file: Element.h
2 * \brief abstract class for Element object
3 * This class is a place holder for the Tria and the Penta elements.
4 * It is derived from Element, so DataSets can contain them.
5 */
6
7#ifndef _ELEMENT_H_
8#define _ELEMENT_H_
9
10/*Headers:*/
[12365]11/*{{{*/
[15067]12#include "../../datastructures/datastructures.h"
[16789]13#include "../../toolkits/toolkits.h"
[15012]14#include "../Update.h"
[3683]15class DataSet;
16class Parameters;
[16912]17class Parameter;
[14996]18class Elements;
19class Loads;
[16912]20class Nodes;
[14996]21class Node;
22class Vertices;
[16912]23class Vertex;
[14996]24class Materials;
[16912]25class Material;
[16693]26class Matpar;
[16912]27class Inputs;
[16675]28class Input;
29class Gauss;
[16799]30class ElementVector;
[13216]31template <class doublematrix> class Matrix;
32template <class doubletype> class Vector;
[16789]33class ElementMatrix;
34class ElementVector;
[3683]35/*}}}*/
36
[4244]37class Element: public Object,public Update{
[3683]38
[16910]39 public:
[16912]40 Inputs *inputs;
41 Node **nodes;
42 Vertex **vertices;
43 Material *material;
44 Matpar *matpar;
45 Parameters *parameters;
[16910]46
[3683]47 public:
[16910]48 /*Constructors/Destructores*/
49 Element();
50 ~Element();
[13623]51
[16910]52 /*Functions*/
[16913]53 void AddInput(Input* input_in);
54 bool AllActive(void);
55 bool AnyActive(void);
56 void DeleteMaterials(void);
57 void FindParam(bool* pvalue,int paramenum);
58 void FindParam(int* pvalue,int paramenum);
59 void FindParam(IssmDouble* pvalue,int paramenum);
60 void FindParam(int** pvalues,int* psize,int paramenum);
61 Input* GetInput(int inputenum);
62 IssmDouble GetMaterialParameter(int enum_in);
63 bool IsFloating();
[16915]64 void StrainRateSSA(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
65 void StrainRateHO(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
66 void StrainRateFS(IssmDouble* epsilon,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input);
[16914]67 IssmDouble TMeltingPoint(IssmDouble pressure);
[16915]68 void ViscosityFS(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input);
69 void ViscosityHO(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
70 void ViscosityL1L2(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* surf);
71 void ViscositySSA(IssmDouble* pviscosity,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input);
72 void ViscositySSADerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
73 void ViscosityHODerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
74 void ViscosityFSDerivativeEpsSquare(IssmDouble* pmu_prime,IssmDouble* epsilon);
[16916]75 void TransformLoadVectorCoord(ElementVector* pe,int transformenum);
76 void TransformLoadVectorCoord(ElementVector* pe,int* transformenum_list);
77 void TransformLoadVectorCoord(ElementVector* pe,int numnodes,int transformenum){_error_("not implemented yet");}; /*Tiling only*/
78 void TransformLoadVectorCoord(ElementVector* pe,int numnodes,int* transformenum_list){_error_("not implemented yet");}; /*Tiling only*/
79 void TransformSolutionCoord(IssmDouble* values,int transformenum);
80 void TransformSolutionCoord(IssmDouble* values,int* transformenum_list);
81 void TransformSolutionCoord(IssmDouble* values,int numnodes,int transformenum);
82 void TransformSolutionCoord(IssmDouble* values,int numnodes,int* transformenum_list);
83 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int transformenum);
84 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int* transformenum_list);
85 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int numnodes,int transformenum);
86 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,int numnodes,int* transformenum_list){_error_("not implemented yet");}; /*Tiling only*/
87 void TransformStiffnessMatrixCoord(ElementMatrix* Ke,Node** nodes_list,int numnodes,int* transformenum_list);
[13623]88
[16910]89 /*Virtual functions*/
[16912]90 virtual void AddBasalInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
91 virtual void AddInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
92 virtual void AddMaterialInput(int input_enum, IssmDouble* values, int interpolation_enum)=0;
[16832]93 virtual IssmDouble CharacteristicLength(void)=0;
[16912]94 virtual void Configure(Elements* elements,Loads* loads,Nodes* nodes,Vertices* vertices,Materials* materials,Parameters* parameters)=0;
95 virtual void SetCurrentConfiguration(Elements* elements,Loads* loads,Nodes* nodes,Materials* materials,Parameters* parameters)=0;
96 virtual void SetwiseNodeConnectivity(int* d_nz,int* o_nz,Node* node,bool* flags,int* flagsindices,int set1_enum,int set2_enum)=0;
[16789]97 virtual ElementMatrix* CreateKMatrix(void)=0;
[16913]98 virtual ElementVector* CreatePVector(void)=0;
[14435]99 virtual void CreateDVector(Vector<IssmDouble>* df)=0;
[13216]100 virtual void CreateJacobianMatrix(Matrix<IssmDouble>* Jff)=0;
[16840]101 virtual void ElementSizes(IssmDouble* phx,IssmDouble* phy,IssmDouble* phz)=0;
[16734]102 virtual void EnthalpyToThermal(IssmDouble* ptemperature,IssmDouble* pwaterfraction,IssmDouble enthalpy,IssmDouble pressure)=0;
[16812]103 virtual IssmDouble EnthalpyDiffusionParameter(IssmDouble enthalpy,IssmDouble pressure)=0;
104 virtual IssmDouble EnthalpyDiffusionParameterVolume(int numvertices,IssmDouble* enthalpy,IssmDouble* pressure)=0;
[16675]105 virtual int FiniteElement(void)=0;
[16810]106 virtual IssmDouble MinEdgeLength(IssmDouble* xyz_list)=0;
[16799]107 virtual void NodalFunctions(IssmDouble* basis,Gauss* gauss)=0;
[16831]108 virtual void NodalFunctionsVelocity(IssmDouble* basis, Gauss* gauss)=0;
109 virtual void NodalFunctionsPressure(IssmDouble* basis, Gauss* gauss)=0;
[16810]110 virtual void NodalFunctionsDerivatives(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
[16831]111 virtual void NodalFunctionsDerivativesVelocity(IssmDouble* dbasis,IssmDouble* xyz_list,Gauss* gauss)=0;
[16839]112 virtual void NormalSection(IssmDouble* normal,IssmDouble* xyz_list)=0;
[16827]113 virtual void NormalTop(IssmDouble* normal,IssmDouble* xyz_list)=0;
[16844]114 virtual void NormalBase(IssmDouble* normal,IssmDouble* xyz_list)=0;
[16813]115 virtual IssmDouble PureIceEnthalpy(IssmDouble pressure)=0;
[16916]116
[16762]117 virtual Element* GetBasalElement(void)=0;
[16675]118 virtual void GetDofList(int** pdoflist,int approximation_enum,int setenum)=0;
119 virtual void GetDofListVelocity(int** pdoflist,int setenum)=0;
120 virtual void GetDofListPressure(int** pdoflist,int setenum)=0;
[16799]121 virtual void JacobianDeterminant(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
[16850]122 virtual void JacobianDeterminantLine(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
[16838]123 virtual void JacobianDeterminantSurface(IssmDouble* Jdet, IssmDouble* xyz_list,Gauss* gauss)=0;
[16803]124 virtual void JacobianDeterminantBase(IssmDouble* Jdet,IssmDouble* xyz_list_base,Gauss* gauss)=0;
[16827]125 virtual void JacobianDeterminantTop(IssmDouble* Jdet,IssmDouble* xyz_list_base,Gauss* gauss)=0;
[16675]126 virtual void GetSolutionFromInputsOneDof(Vector<IssmDouble>* solution,int solutionenum)=0;
[5719]127 virtual int GetNodeIndex(Node* node)=0;
[13886]128 virtual int GetNumberOfNodes(void)=0;
[16715]129 virtual int GetNumberOfNodesVelocity(void)=0;
130 virtual int GetNumberOfNodesPressure(void)=0;
[16727]131 virtual int GetNumberOfVertices(void)=0;
[13892]132 virtual void GetNodesSidList(int* sidlist)=0;
[16042]133 virtual void GetNodesLidList(int* sidlist)=0;
[13892]134
[7089]135 virtual int Sid()=0;
[12471]136 virtual bool IsNodeOnShelfFromFlags(IssmDouble* flags)=0;
[5745]137 virtual bool IsOnBed()=0;
[16827]138 virtual bool IsOnSurface()=0;
[16872]139 virtual void GetGroundedPart(int* point1,IssmDouble* fraction1,IssmDouble* fraction2, bool* mainlyfloating)=0;
140 virtual IssmDouble GetGroundedPortion(IssmDouble* xyz_list)=0;
[16693]141 virtual void GetInputListOnNodes(IssmDouble* pvalue,int enumtype)=0;
142 virtual void GetInputListOnNodes(IssmDouble* pvalue,int enumtype,IssmDouble defaultvalue)=0;
[12471]143 virtual void GetInputListOnVertices(IssmDouble* pvalue,int enumtype)=0;
144 virtual void GetInputListOnVertices(IssmDouble* pvalue,int enumtype,IssmDouble defaultvalue)=0;
[16848]145 virtual Input* GetMaterialInput(int inputenum)=0;
[12471]146 virtual void GetInputValue(IssmDouble* pvalue,Node* node,int enumtype)=0;
[16675]147 virtual void GetInputValue(bool* pvalue,int enum_type)=0;
148 virtual void GetInputValue(int* pvalue,int enum_type)=0;
149 virtual void GetInputValue(IssmDouble* pvalue,int enum_type)=0;
[16873]150 virtual void GetInputValue(IssmDouble* pvalue,Gauss* gauss,int enum_type)=0;
[16907]151 virtual Node* GetNode(int node_number)=0;
[16698]152 virtual void GetVerticesCoordinates(IssmDouble** xyz_list)=0;
[16803]153 virtual void GetVerticesCoordinatesBase(IssmDouble** xyz_list)=0;
[16827]154 virtual void GetVerticesCoordinatesTop(IssmDouble** xyz_list)=0;
[16839]155 virtual IssmDouble GetZcoord(Gauss* gauss)=0;
[16866]156 virtual IssmDouble GetYcoord(Gauss* gauss)=0;
[16188]157 virtual void GetMaterialInputValue(IssmDouble* pvalue,Node* node,int enumtype)=0;
[13623]158
[12471]159 virtual IssmDouble SurfaceArea(void)=0;
[4931]160 virtual void InputDepthAverageAtBase(int enum_type,int average_enum_type,int object_enum)=0;
[16693]161 virtual void InputChangeName(int enum_type,int enum_type_old)=0;
[13216]162 virtual void ComputeBasalStress(Vector<IssmDouble>* sigma_b)=0;
163 virtual void ComputeStrainRate(Vector<IssmDouble>* eps)=0;
[16848]164 virtual void ComputeStressTensor(void)=0;
[16461]165 virtual void ResultInterpolation(int* pinterpolation,int output_enum)=0;
[16589]166 virtual void ResultToVector(Vector<IssmDouble>* vector,int output_enum)=0;
[15613]167 virtual void Update(int index, IoModel* iomodel,int analysis_counter,int analysis_type,int finite_element)=0;
[8967]168 virtual void InputDuplicate(int original_enum,int new_enum)=0;
[16208]169 virtual void InputCreate(IssmDouble* vector,IoModel* iomodel,int M,int N,int vector_type,int vector_enum,int code)=0;
[16715]170 virtual void InputUpdateFromSolutionOneDofCollapsed(IssmDouble* solution,int inputenum)=0;
[16717]171 virtual void InputUpdateFromSolutionOneDof(IssmDouble* solution,int inputenum)=0;
[13623]172
[15130]173 virtual int NodalValue(IssmDouble* pvalue, int index, int natureofdataenum)=0;
[16675]174 virtual int NumberofNodesVelocity(void)=0;
175 virtual int NumberofNodesPressure(void)=0;
176 virtual Gauss* NewGauss(void)=0;
[16799]177 virtual Gauss* NewGauss(int order)=0;
[16838]178 virtual Gauss* NewGauss(IssmDouble* xyz_list, IssmDouble* xyz_list_front,int order)=0;
[16839]179 virtual Gauss* NewGauss(IssmDouble* xyz_list, IssmDouble* xyz_list_front,int order_horiz,int order_vert)=0;
[16872]180 virtual Gauss* NewGauss(int point1,IssmDouble fraction1,IssmDouble fraction2,bool mainlyfloating,int order)=0;
[16803]181 virtual Gauss* NewGaussBase(int order)=0;
[16850]182 virtual Gauss* NewGaussLine(int vertex1,int vertex2,int order)=0;
[16827]183 virtual Gauss* NewGaussTop(int order)=0;
[16803]184 virtual ElementVector* NewElementVector(int approximation_enum=NoneApproximationEnum)=0;
[16818]185 virtual ElementMatrix* NewElementMatrix(int approximation_enum=NoneApproximationEnum)=0;
[12471]186 virtual void InputScale(int enum_type,IssmDouble scale_factor)=0;
[13216]187 virtual void GetVectorFromInputs(Vector<IssmDouble>* vector, int name_enum)=0;
[12471]188 virtual IssmDouble TimeAdapt()=0;
189 virtual void PositiveDegreeDay(IssmDouble* pdds,IssmDouble* pds,IssmDouble signorm)=0;
[12748]190 virtual void Delta18oParameterization(void)=0;
[16721]191 virtual void SmbGradients(void)=0;
192 virtual Element* SpawnBasalElement(void)=0;
[16789]193 virtual void ReduceMatrices(ElementMatrix* Ke,ElementVector* pe)=0;
[10440]194 virtual void ResetCoordinateSystem()=0;
[16810]195 virtual IssmDouble StabilizationParameter(IssmDouble u, IssmDouble v, IssmDouble w, IssmDouble diameter, IssmDouble kappa)=0;
[16860]196 virtual void ValueP1OnGauss(IssmDouble* pvalue,IssmDouble* values,Gauss* gauss)=0;
197 virtual void ValueP1DerivativesOnGauss(IssmDouble* dvalue,IssmDouble* values,IssmDouble* xyz_list,Gauss* gauss)=0;
[16810]198 virtual void ViscousHeating(IssmDouble* pphi,IssmDouble* xyz_list,Gauss* gauss,Input* vx_input,Input* vy_input,Input* vz_input)=0;
[16915]199
[16675]200 virtual int VelocityInterpolation()=0;
201 virtual int PressureInterpolation()=0;
[16833]202 virtual bool IsZeroLevelset(int levelset_enum)=0;
[16838]203 virtual void ZeroLevelsetCoordinates(IssmDouble** pxyz_zero,IssmDouble* xyz_list,int levelsetenum)=0;
[9817]204
205 #ifdef _HAVE_RESPONSES_
[15387]206 virtual void AverageOntoPartition(Vector<IssmDouble>* partition_contributions,Vector<IssmDouble>* partition_areas,IssmDouble* vertex_response,IssmDouble* qmu_part)=0;
[15130]207 virtual void MinVel(IssmDouble* pminvel)=0;
208 virtual void MaxVel(IssmDouble* pmaxvel)=0;
209 virtual void MinVx(IssmDouble* pminvx)=0;
210 virtual void MaxVx(IssmDouble* pmaxvx)=0;
211 virtual void MaxAbsVx(IssmDouble* pmaxabsvx)=0;
212 virtual void MinVy(IssmDouble* pminvy)=0;
213 virtual void MaxVy(IssmDouble* pmaxvy)=0;
214 virtual void MaxAbsVy(IssmDouble* pmaxabsvy)=0;
215 virtual void MinVz(IssmDouble* pminvz)=0;
216 virtual void MaxVz(IssmDouble* pmaxvz)=0;
217 virtual void MaxAbsVz(IssmDouble* pmaxabsvz)=0;
218 virtual IssmDouble MassFlux(IssmDouble* segment)=0;
[16388]219 virtual IssmDouble MassFlux(IssmDouble x1,IssmDouble y1, IssmDouble x2, IssmDouble y2,int segment_id)=0;
[15129]220 virtual void ElementResponse(IssmDouble* presponse,int response_enum)=0;
[12471]221 virtual IssmDouble IceVolume(void)=0;
[16275]222 virtual IssmDouble IceVolumeAboveFloatation(void)=0;
[12773]223 virtual IssmDouble TotalSmb(void)=0;
[16787]224 virtual IssmDouble Misfit(int modelenum,int observationenum,int weightsenum)=0;
[16849]225 virtual int VertexConnectivity(int vertexindex)=0;
[16850]226 virtual void VerticalSegmentIndices(int** pindices,int* pnumseg)=0;
[9817]227 #endif
[4055]228
[14589]229 #ifdef _HAVE_GIA_
[14807]230 virtual void GiaDeflection(Vector<IssmDouble>* wg,Vector<IssmDouble>* dwgdt,IssmDouble* x,IssmDouble* y)=0;
[14589]231 #endif
232
[9817]233 #ifdef _HAVE_CONTROL_
[13216]234 virtual void Gradj(Vector<IssmDouble>* gradient,int control_type,int control_index)=0;
[16314]235 virtual IssmDouble ThicknessAbsMisfit(void)=0;
236 virtual IssmDouble SurfaceAbsVelMisfit(void)=0;
237 virtual IssmDouble SurfaceRelVelMisfit(void)=0;
238 virtual IssmDouble SurfaceLogVelMisfit(void)=0;
239 virtual IssmDouble SurfaceLogVxVyMisfit(void)=0;
240 virtual IssmDouble SurfaceAverageVelMisfit(void)=0;
241 virtual IssmDouble ThicknessAbsGradient(void)=0;
242 virtual IssmDouble ThicknessAlongGradient(void)=0;
243 virtual IssmDouble ThicknessAcrossGradient(void)=0;
244 virtual IssmDouble BalancethicknessMisfit(void)=0;
245 virtual IssmDouble RheologyBbarAbsGradient(void)=0;
246 virtual IssmDouble DragCoefficientAbsGradient(void)=0;
[13216]247 virtual void ControlInputGetGradient(Vector<IssmDouble>* gradient,int enum_type,int control_index)=0;
[12471]248 virtual void ControlInputSetGradient(IssmDouble* gradient,int enum_type,int control_index)=0;
249 virtual void ControlInputScaleGradient(int enum_type, IssmDouble scale)=0;
[16494]250 virtual void ControlToVectors(Vector<IssmPDouble>* vector_control, Vector<IssmPDouble>* vector_gradient,int control_enum)=0;
[13216]251 virtual void GetVectorFromControlInputs(Vector<IssmDouble>* gradient,int control_enum,int control_index,const char* data)=0;
[12471]252 virtual void SetControlInputsFromVector(IssmDouble* vector,int control_enum,int control_index)=0;
253 virtual void InputControlUpdate(IssmDouble scalar,bool save_parameter)=0;
[9817]254 #endif
[14796]255
[16442]256 virtual void UpdateConstraintsExtrudeFromBase(void)=0;
257 virtual void UpdateConstraintsExtrudeFromTop(void)=0;
258
[15853]259 #ifdef _HAVE_THERMAL_
[16272]260 virtual void UpdateBasalConstraintsEnthalpy(void)=0;
[16026]261 virtual void ComputeBasalMeltingrate(void)=0;
[16816]262 virtual void DrainWaterfraction(IssmDouble* drainrate_element)=0;
[15853]263 #endif
264
[14796]265 #ifdef _HAVE_HYDROLOGY_
[14967]266 virtual void GetHydrologyDCInefficientHmax(IssmDouble* ph_max, Node* innode)=0;
[16761]267 virtual void GetHydrologyDCInefficientHmax(IssmDouble* ph_max, int index)=0;
[15015]268 virtual void GetHydrologyTransfer(Vector<IssmDouble>* transfer)=0;
[15249]269 virtual void HydrologyEPLGetMask(Vector<IssmDouble>* mask)=0;
270 virtual void HydrologyEPLGetActive(Vector<IssmDouble>* active)=0;
[16600]271 virtual void ComputeEPLThickness(void)=0;
[14796]272 #endif
[15643]273
[15386]274 #ifdef _HAVE_GROUNDINGLINE_
[15962]275 virtual void MigrateGroundingLine(IssmDouble* sheet_ungrounding)=0;
[15386]276 virtual void PotentialUngrounding(Vector<IssmDouble>* potential_sheet_ungrounding)=0;
277 virtual int UpdatePotentialUngrounding(IssmDouble* potential_sheet_ungrounding,Vector<IssmDouble>* vec_nodes_on_iceshelf,IssmDouble* nodes_on_iceshelf)=0;
278 #endif
279
[3683]280};
281#endif
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