source: issm/oecreview/Archive/21337-21723/ISSM-21684-21685.diff@ 21726

../trunk-jpl/externalpackages/petsc/install-3.7-pleiades_dakota6.2.sh

@@ -1 @@
-#!/bin/bash
-set -eu
-
-#Some cleanup
-rm -rf install petsc-3.7.6 src
-mkdir install src
-
-#Download from ISSM server
-$ISSM_DIR/scripts/DownloadExternalPackage.py 'http://issm.jpl.nasa.gov/files/externalpackages/petsc-lite-3.7.6.tar.gz' 'petsc-3.7.6.tar.gz'
-
-#Untar and move petsc to install directory
-tar -zxvf  petsc-3.7.6.tar.gz
-mv petsc-3.7.6/* src/
-rm -rf petsc-3.7.6
-
-#configure
-cd src
-./config/configure.py \
-        --prefix="$ISSM_DIR/externalpackages/petsc/install" \
-        --PETSC_DIR="$ISSM_DIR/externalpackages/petsc/src" \
-        --with-cc=icc --with-cxx=icpc --with-fc=ifort --with-f77=ifort \
-        --with-blas-lapack-dir="/nasa/intel/mkl/10.0.011" \
-        --known-mpi-shared-libraries=1 \
-        --with-debugging=0 \
-        --with-valgrind=0 \
-        --with-x=0 \
-        --with-ssl=0 \
-        --with-batch=1  \
-        --with-shared-libraries=1 \
-        --download-metis=1 \
-        --download-parmetis=1 \
-        --download-mumps=1 \
-        --download-scalapack=1 \
-        --download-ml=1 \
-        --download-pastix=1 \
-        --download-ptscotch=1 \
-        --download-hypre=1 \
-        --download-euclid=1 \
-        --download-spooles=1 \
-        --download-spai=1 \
-        --download-superlu_dist=1 \
-        --download-scalapack=1 
-
-#prepare script to reconfigure petsc
-cat > script.queue << EOF
-#PBS -S /bin/bash
-#PBS -l select=1:ncpus=1:model=bro
-#PBS -l walltime=200 
-#PBS -W group_list=s1690
-#PBS -m e 
-
-. /usr/share/modules/init/bash 
-module load comp-intel/2016.2.181
-module load mpi-sgi/mpt
-module load math/intel_mkl_64_10.0.011
-
-export PATH="$PATH:." 
-export MPI_GROUP_MAX=64 
-mpiexec -np 1 ./conftest-arch-linux2-c-opt
-EOF
-
-#print instructions
-echo "== Now: cd src/ "
-echo "== qsub -q devel script.queue "
-echo "== Then run reconfigure script generated by PETSc and follow instructions"

../trunk-jpl/externalpackages/petsc/install-3.7-pleiades.sh

@@ -30 +30 @@
         --download-metis=1 \
         --download-parmetis=1 \
         --download-mumps=1 \
-        --download-scalapack=1 \
-        --download-ml=1 \
-        --download-pastix=1 \
-        --download-ptscotch=1 \
-        --download-hypre=1 \
-        --download-euclid=1 \
-        --download-spooles=1 \
-        --download-spai=1 \
-        --download-superlu_dist=1 \
         --download-scalapack=1 
 
 #prepare script to reconfigure petsc
@@ -50 +41 @@
 #PBS -m e 
 
 . /usr/share/modules/init/bash 
+module load pkgsrc
 module load comp-intel/2016.2.181
 module load mpi-sgi/mpt