source: issm/oecreview/Archive/19101-20495/ISSM-20368-20369.diff

../trunk-jpl/jenkins/macosx_pine-island_static

@@ +1 @@
+
+#-------------------------------#
+# 1: ISSM general configuration #
+#-------------------------------#
+
+#MATLAB path
+MATLAB_PATH="/Applications/MATLAB_R2015b.app/"
+
+#ISSM CONFIGURATION 
+ISSM_CONFIG='--prefix=$ISSM_DIR \
+        --disable-shared \
+        --enable-standalone-executables \
+        --enable-standalone-modules \
+        --with-matlab-dir=$MATLAB_PATH \
+        --with-triangle-dir=$ISSM_DIR/externalpackages/triangle/install \
+        --with-mpi-include=$ISSM_DIR/externalpackages/mpich/install/include  \
+        --with-mpi-libflags="-L$ISSM_DIR/externalpackages/mpich/install/lib -lpmpich -lmpich -lmpl" \
+        --with-petsc-dir=$ISSM_DIR/externalpackages/petsc/install  \
+        --with-scalapack-dir=$ISSM_DIR/externalpackages/petsc/install/ \
+        --with-mumps-dir=$ISSM_DIR/externalpackages/petsc/install \
+        --with-metis-dir=$ISSM_DIR/externalpackages/petsc/install \
+        --with-m1qn3-dir=$ISSM_DIR/externalpackages/m1qn3/install \
+        --with-numthreads=4 \
+        --enable-debugging \
+        --enable-development'
+
+#PYTHON and MATLAB testing
+MATLAB_TEST=1
+PYTHON_TEST=0
+
+#execution path used for parallel runs
+EXECUTION_PATH=$ISSM_DIR/execution
+
+#repo:
+REPOSITORY="https://issm.ess.uci.edu/svn/issm/issm/trunk-jpl"
+SVN='/usr/local/bin/svn'
+SVNVERSION='/usr/local/bin/svnversion'
+
+#-----------------------------------#
+# 3: External packages installation #
+#-----------------------------------#
+
+#ISSM_EXTERNALPACKAGES can have 3 values:
+# - "install" install all external packages listed below
+# - "copy"    copy existing directories (EXTERNALPACKAGESDIR)
+# - "none"    leave external packages as is
+#             ->skip to section 4
+ISSM_EXTERNALPACKAGES="install"
+EXTERNALPACKAGESDIR=$ISSM_DIR/externalpackages
+
+#List of external pakages to be installed and their installation scripts
+EXTERNALPACKAGES="autotools    install.sh
+                                                cmake        install.sh
+                                                mpich        install-3.0-macosx64.sh
+                                                m1qn3        install.sh
+                                                petsc        install-3.6-macosx64.sh
+                                                triangle     install-macosx64.sh
+                                                shell2junit  install.sh"
+
+#---------------------#
+# 4: ISSM Compilation #
+#---------------------#
+
+#ISSM_COMPILATION can have 2 values:
+# - "yes" compile ISSM
+# - "no"  do not compile ISSM
+ISSM_COMPILATION="yes"
+
+#------------------------#
+# 5: Nightly run options #
+#------------------------#
+
+#number of cpus used in ISSM installation and compilation (one is usually
+#safer as some packages are very sensitive to parallel compilation)
+NUMCPUS_INSTALL=4
+
+#number of cpus used in the nightly runs.
+NUMCPUS_RUN=2
+
+#Nightly run options. The matlab routine runme.m will be called
+#as follows: runme($MATLAB_NROPTIONS). The options must be understandable
+#by Matlab and runme.m
+#ex: "'id',[101 102 103]"
+##                           bamg mesh   FS                     
+PYTHON_NROPTIONS=""
+MATLAB_NROPTIONS="'exclude',[119,243,514,701,702,703,435,IdFromString('Dakota')]"