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proj/ice/larour/issm-uci-clean/trunk-jpl/awards
1 beeping award2 Matlab's beeps (for error messages) have been successfully desactivated by Mathieu, with the command "beep off". (Mathieu, December 10th 2010) -
proj/ice/larour/issm-uci-clean/trunk-jpl/tidbits
1 There is no technological frontier. (Mathieu, May 5th 2009)2 3 Thierry? Non il est pas la. Son bureau est la ... (Mathieu, May 15th 2009)4 5 Le modeling, c'est comme la cuisine, il faut des bons ingredients. Nous on veut ouvrir un michelin 3 etoiles, pas un macdo. (Eric R, May 20th 2009)6 7 C'est bizarre, ces modeles 3d sont independants de la connectivite... c'est vraiment bizarre ce truc. Je la met a 15, a 50 ou a 500 et le temps de calcul reste le meme.8 2 mois plus tard: on se rend compte que dans extrude.m on met md.connectivity=25; (Mathieu, June 9th 2009)9 10 ca existe pas morronitos! (Mathieu, June 10th 2009)11 12 tu fais tac tac tac tac, soit tu fais shift tac tac (a propos de 'ZZ' au lieu de ':wq')(Mathieu, June 18th 2009)13 14 Eric "quel hmin tu utilises? " Mathieu "Hmin? ben d'y a 2 semaines!" (Mathieu September 2009)15 16 "tu devrais mettre les spc dans le vertical" rep:"Mais il n'y en a pas de spc sur le vertical pour l'instant" (Helene September 23rd 2009)17 18 A propos de pairoptions "bon pour l'instant on voit pas trop la puissance mais ca viendra je pense..." (Mathieu October 6th 2009)19 20 Dimitris "Ala, when do you want to do your presentation? next week, the week after?" answer "let me give you a date in two weeks"21 "but you know, it is a place to present unfinished work!" "I know, I will try to get my work unfinished then..." (Ala October 14th 2009)22 23 "Bande d'oRignot" (orignaux=moose) (Eric July 22d 2010)24 25 "Eric, ton article il faut le faire mousser" (Eric R March 28th 2011 pers com)26 27 "Mathieu, J'essaye de faire un print et ce ** de matlab veut pas printer:28 >> printmodel('Article/figures/PigBamg','png','trim','on','resolution',resolution);29 >> ??? Error using ==> print at 31030 >> Error using ==> render at 17931 >> Bad data returned by HARDCOPY. Not calling IMWRITE.32 Mathieu: regarde resolution, c'est combien?33 Eric: 9900 (NDLR: ca ne doit pas depasser 3 ou 4!)... ca ca fait une image de 500Go au moins, il a confondu avec la resolution du maillage" (Eric L April 12th 2011)34 35 "Bon, j'irais bien manger mes seigneurs. OK adios." Still no clue on what that means. (Mathieu, April 28th 2011).36 37 On appelle en fait recursivement les functions d'inputs. C'est simple, c'est beau, c'est bosch (Mathieu, June 2011).38 39 ISSM,40 You can start to make a new working directory on your local machine, and41 checkout from the new server. Here are the steps:42 1. Login to your working machine43 2. cd your_working_dir44 3. checkout45 svn co https://issm-svn.jpl.nasa.gov:80/svn/issm/issm .46 .........47 Thanks and have a good weekend,48 George49 Hi George,50 At step 3, I got the error "checkout command not found".51 Please advise. Thanks52 -Daria53 (Daria, November 19th 2011)54 55 -
proj/ice/larour/issm-uci-clean/trunk-jpl/contributors.txt
1 We thank the following contributors for their help in making ISSM better!2 3 Robert Crippen, Jet Propulsion Laboratory. robbert.crippen@jpl.nasa.gov4 HoleFiller routines to plug incomplete datasets. See HoleFiller module in src/m/matlab/utils5 6 Point Inclusion in Polygon Test (pnpoly.c used in Utils/Arguscontourtomesh/IsInPoly.c)7 W. Randolph Franklin (WRF)8 http://www.ecse.rpi.edu/Homepages/wrf/Research/Short_Notes/pnpoly.html9 10 DACE: A Matlab Kriging toolbox, Søren N.Lophaen, Hans Bruun Nielsen and Jacob11 Søndergaard (Technical University of Denmark)12 http://www2.imm.dtu.dk/~hbn/dace/ -
proj/ice/larour/issm-uci-clean/trunk-jpl/AUTHORS
7 7 Development manager: 8 8 Eric Larour <eric.larour@jpl.nasa.gov> 9 9 10 Current developers:10 Current core developers: 11 11 * Eric Larour <eric.larour@jpl.nasa.gov> 12 12 * Helene Seroussi <helene.seroussi@jpl.nasa.gov> 13 13 * Mathieu Morlighem <mathieu.morlighem@jpl.nasa.gov> 14 15 16 Contributors: 17 We thank the following contributors for their help in making ISSM better! 18 19 Robert Crippen, Jet Propulsion Laboratory. robbert.crippen@jpl.nasa.gov 20 HoleFiller routines to plug incomplete datasets. See HoleFiller module in src/m/matlab/utils 21 22 Point Inclusion in Polygon Test (pnpoly.c used in Utils/Arguscontourtomesh/IsInPoly.c) 23 W. Randolph Franklin (WRF) 24 http://www.ecse.rpi.edu/Homepages/wrf/Research/Short_Notes/pnpoly.html 25 26 DACE: A Matlab Kriging toolbox, Søren N.Lophaen, Hans Bruun Nielsen and Jacob 27 Søndergaard (Technical University of Denmark) 28 http://www2.imm.dtu.dk/~hbn/dace/ -
proj/ice/larour/issm-uci-clean/trunk-jpl/src/c/Container/Elements.cpp
186 186 parameters->FindParam(&numberofelements,MeshNumberofelementsEnum); 187 187 188 188 if(!results_as_patches){ 189 /*No patch here, we prepare vectors*/ 189 190 190 191 /*see what the first element of this partition has in stock (this is common to all partitions)*/ 191 192 if(my_rank==0){ -
proj/ice/larour/issm-uci-clean/trunk-jpl/ChangeLog
1 2009-04-22 17:03 seroussi 1 Go to 2 2 3 * test/Verification/: test1_icesheet_noicefront/Front.exp, 4 test2_icesheet_icefront/Square.par, 5 test3_iceshelf_icefront/Square.par, 6 test4_icesheet_noicefront_3d/Front.exp, 7 test5_icesheet_icefront_3d/Square.par, 8 test6_iceshelf_icefront_3d/Square.par, 9 test7_penalties_iceshelf_3d/Square.par, 10 test8_icesheet_noicefront_stokes/Front.exp, 11 test9_icesheet_icefront_stokes/Square.par, 12 test10_iceshelf_icefront_stokes/Square.par, 13 test11_penalties_iceshelf_allmodels/Square.par, 14 test_cielo/Square.par: simplified Square.par in tests 15 16 2009-04-22 16:00 seroussi 17 18 * src/m/classes/@model/model.m: minor 19 20 2009-04-22 11:56 jschierm 21 22 * src/m/classes/public/displayqmu.m: Still trying to get displayqmu 23 right. 24 25 2009-04-22 09:57 jschierm 26 27 * src/m/classes/: @model/model.m, public/displayqmu.m: Slight 28 changes in model class for qmu defaults.. 29 30 2009-04-22 09:26 morlighe 31 32 * src/m/classes/public/: plugdata.m, plugvelocities.m: minor 33 34 2009-04-22 07:46 seroussi 35 36 * test/Verification/test5_icesheet_icefront_3d/: Square.par, 37 archive_melting.mat, archive_melting_transient.mat, 38 archive_pattyn.mat, archive_temperature.mat, 39 archive_temperature_transient.mat, archive_thickness.mat: new 40 archives for test5 with default parameters 41 42 2009-04-22 07:24 seroussi 43 44 * test/Verification/test9_icesheet_icefront_stokes/: 45 archive_melting.mat, archive_stokes.mat, archive_temperature.mat: 46 test9 updated archives with default parameters 47 48 2009-04-21 17:03 morlighe 49 50 * src/m/utils/BC/: SetIceSheetBC.m, SetIceShelfBC.m, 51 SetMarineIceSheetBC.m: Added 2 other BC creation routines 52 53 2009-04-21 16:53 seroussi 54 55 * test/Verification/test8_icesheet_noicefront_stokes/: 56 archive_melting.mat, archive_stokes.mat, archive_temperature.mat: 57 test8 updated archives with default parameters 58 59 2009-04-21 16:50 seroussi 60 61 * test/Verification/test7_penalties_iceshelf_3d/: 62 archive_melting.mat, archive_temperature.mat, 63 archive_velocity.mat: test7 updated archives with default 64 parameters 65 66 2009-04-21 16:49 seroussi 67 68 * test/Verification/test6_iceshelf_icefront_3d/: 69 archive_melting.mat, archive_melting_transient.mat, 70 archive_pattyn.mat, archive_temperature.mat, 71 archive_temperature_transient.mat, archive_thickness.mat: test6 72 updated archives with default parameters 73 74 2009-04-21 16:49 seroussi 75 76 * test/Verification/test4_icesheet_noicefront_3d/: 77 archive_hutter.mat, archive_melting.mat, archive_pattyn.mat, 78 archive_temperature.mat: test4 updated archives with default 79 parameters 80 81 2009-04-21 16:47 seroussi 82 83 * test/Verification/test3_iceshelf_icefront/: archive_acc.mat, 84 archive_ice.mat, archive_macayeal.mat, archive_thickness.mat: 85 test3 archives with default parameters 86 87 2009-04-21 16:45 seroussi 88 89 * test/Verification/test3_iceshelf_icefront/Square.par: minor 90 91 2009-04-21 16:18 morlighe 92 93 * src/m/classes/public/plugvelocities.m: minor 94 95 2009-04-21 16:11 seroussi 96 97 * src/m/classes/public/ismodelselfconsistent.m: minor 98 99 2009-04-21 16:09 morlighe 100 101 * src/m/classes/public/parameterize.m: better error message 102 103 2009-04-21 15:52 jschierm 104 105 * src/m/classes/: @model/model.m, public/displayqmu.m: Elimination 106 of qmu parameters that will be contained within qmu_params 107 structure. 108 109 2009-04-21 15:36 morlighe 110 111 * src/m/classes/public/: plugdata.m, plugvelocities.m: Added 2 112 useful routines to load data and plug them onto the model easily 113 (cf Eric Rignot's comments) 114 115 2009-04-21 15:23 jschierm 116 117 * src/m/solutions/dakota/: dakota_in_data.m, dakota_in_write.m, 118 dakota_m_write.m, setupdesign/QmuSetupDesign.m, 119 setupdesign/setupdrag.m, setupdesign/setupgravity.m, 120 setupdesign/setupheatcapacity.m, setupdesign/setuprhoice.m, 121 setupdesign/setuprhowater.m, setupdesign/setupriftsfriction.m, 122 setupdesign/setupthermalconductivity.m, 123 setupdesign/setupthickness.m, 124 updatefunctions/QmuUpdateFunctions.m, 125 updatefunctions/updatedrag.m, updatefunctions/updategravity.m, 126 updatefunctions/updateheatcapacity.m, 127 updatefunctions/updaterho_ice.m, 128 updatefunctions/updaterho_water.m, 129 updatefunctions/updateriftsfriction.m, 130 updatefunctions/updatethermalconductivity.m, 131 updatefunctions/updatethickness.m: Addition of varargin so that 132 ISSM can pass model and other data transparently through Dakota 133 scripts to QmuSetupDesign and QmuUpdateFunctions. 134 135 2009-04-21 15:01 seroussi 136 137 * src/m/classes/public/ismodelselfconsistent.m: minor typo 138 139 2009-04-21 14:58 seroussi 140 141 * test/Verification/test11_penalties_iceshelf_allmodels/: 142 Square.par, archive_melting.mat, archive_temperature.mat, 143 archive_velocity.mat: test11 archives + beginning of Square.par 144 145 2009-04-21 14:58 seroussi 146 147 * test/Verification/test10_iceshelf_icefront_stokes/: Square.par, 148 archive_melting.mat, archive_stokes.mat, archive_temperature.mat: 149 test10 archives + beginning of Square.par 150 151 2009-04-21 14:56 seroussi 152 153 * test/Verification/: test3_iceshelf_icefront/Square.par, 154 test5_icesheet_icefront_3d/Square.par, 155 test6_iceshelf_icefront_3d/Square.par, 156 test7_penalties_iceshelf_3d/Square.par, 157 test9_icesheet_icefront_stokes/Square.par: beginning of 158 Square.par 159 160 2009-04-21 14:55 seroussi 161 162 * test/Verification/test2_icesheet_icefront/: Square.par, 163 archive_acc.mat, archive_hutter.mat, archive_ice.mat, 164 archive_macayeal.mat, archive_thickness.mat: test2 archives + 165 beginning of Square.par 166 167 2009-04-21 14:55 seroussi 168 169 * test/Verification/test1_icesheet_noicefront/: archive_acc.mat, 170 archive_hutter.mat, archive_ice.mat, archive_macayeal.mat: test1 171 archives 172 173 2009-04-21 14:34 jschierm 174 175 * src/m/solutions/dakota/: dakota_in_data.m, dakota_in_write.m, 176 dakota_m_write.m, setupdesign/QmuSetupDesign.m, 177 setupdesign/setupdrag.m, setupdesign/setupgravity.m, 178 setupdesign/setupheatcapacity.m, setupdesign/setuprhoice.m, 179 setupdesign/setuprhowater.m, setupdesign/setupriftsfriction.m, 180 setupdesign/setupthermalconductivity.m, 181 setupdesign/setupthickness.m, 182 updatefunctions/QmuUpdateFunctions.m, 183 updatefunctions/updatedrag.m, updatefunctions/updategravity.m, 184 updatefunctions/updateheatcapacity.m, 185 updatefunctions/updaterho_ice.m, 186 updatefunctions/updaterho_water.m, 187 updatefunctions/updateriftsfriction.m, 188 updatefunctions/updatethermalconductivity.m, 189 updatefunctions/updatethickness.m: Removal of model class so that 190 Dakota and ISSM scripts are independent. 191 192 2009-04-21 14:06 morlighe 193 194 * src/m/classes/public/ismodelselfconsistent.m: 195 Ismodelselfconsistent rewritten 196 197 2009-04-21 13:37 seroussi 198 199 * src/m/utils/UpdateArchive/updatearchive.m: to fit the new names 200 201 2009-04-21 13:28 seroussi 202 203 * test/Verification/: test1_icesheet_noicefront/Square.par, 204 test4_icesheet_noicefront_3d/Square.par, 205 test8_icesheet_noicefront_stokes/Square.par: cosmetics 206 207 2009-04-21 12:27 morlighe 208 209 * src/m/classes/public/parameterize.m: Fixed parameter file error 210 message 211 212 2009-04-21 12:03 seroussi 213 214 * test/Verification/test8_icesheet_noicefront_stokes/: Square.par, 215 runme.m: simplified Square.par for IceSheet test 8 216 217 2009-04-21 12:02 seroussi 218 219 * test/Verification/test4_icesheet_noicefront_3d/: Square.par, 220 runme.m: simplified Sqaure.par for test4 221 222 2009-04-21 12:01 seroussi 223 224 * test/Verification/test1_icesheet_noicefront/: Square.par, 225 runme.m: simplified Square.par test1 226 227 2009-04-21 11:54 seroussi 228 229 * src/m/classes/public/ismodelselfconsistent.m: precised some 230 checks depending on solutiontype 231 232 2009-04-21 11:53 seroussi 233 234 * src/m/utils/BC/SetIceSheetBC.m: set melting and accumulation to 235 zeros if nothing specified 236 237 2009-04-21 11:21 jschierm 238 239 * src/m/classes/: @continuous_design/continuous_design.m, 240 @continuous_design/display.m, 241 @continuous_state/continuous_state.m, 242 @least_squares_term/least_squares_term.m, 243 @normal_uncertain/normal_uncertain.m, 244 @objective_function/objective_function.m, 245 @response_function/response_function.m, 246 @linear_equality_constraint/linear_equality_constraint.m, 247 @linear_inequality_constraint/linear_inequality_constraint.m, 248 @nonlinear_equality_constraint/nonlinear_equality_constraint.m, 249 @nonlinear_inequality_constraint/nonlinear_inequality_constraint.m: 250 Set defaults to Dakota values but filter them out before writing. 251 252 2009-04-21 10:54 seroussi 253 254 * src/m/classes/public/ismodelselfconsistent.m: optimized 255 ismodelselfconsistent depending on package, solutiontype 256 257 2009-04-21 10:53 seroussi 258 259 * src/m/utils/BC/SetIceSheetBC.m: new routine to create IceSheetBC 260 261 2009-04-21 09:43 jschierm 262 263 * src/m/utils/Array/allequal.m: Function to return empty array if 264 all array elements are equal to given value. 265 266 2009-04-20 17:34 morlighe 267 268 * src/m/classes/@model/model.m: Added some initial values in model 269 270 2009-04-20 10:28 morlighe 271 272 * src/m/classes/public/plot/plot_streamlines.m: minor 273 274 2009-04-20 10:24 morlighe 275 276 * src/m/classes/public/plot/: applyoptions.m, parse_options.m, 277 plot_streamlines.m, plotdoc.m: Added streamlines plot options, 278 still some bugs due to tsearch matlab function 279 280 2009-04-20 09:57 seroussi 281 282 * test/Validation/ISMIP/TestD/Square.par: minor typo 283 284 2009-04-20 08:33 seroussi 285 286 * src/m/classes/public/plot/plot_basaldrag.m: possibility of doing 287 sectionvalues on basal_drag 288 289 2009-04-17 17:20 seroussi 290 291 * src/m/classes/public/plot/plotdoc.m: added capability in doc 292 293 2009-04-17 17:19 seroussi 294 295 * src/m/classes/public/plot/plot_dealer.m: added basal_drag x or y 296 in plot 297 298 2009-04-17 17:18 seroussi 299 300 * src/m/classes/public/plot/plot_basaldrag.m: added x or y 301 component in basal_drag 302 303 2009-04-17 16:20 jschierm 304 305 * src/m/classes/: @model/model.m, public/displayqmu.m: Replacement 306 of comments that got clobbered in previous commit (oops). 307 308 2009-04-17 16:13 jschierm 309 310 * src/m/classes/: @model/model.m, public/displayqmu.m: Addition of 311 qmu_method and qmu_params to model class. 312 313 2009-04-17 10:25 jschierm 314 315 * src/m/solutions/dakota/: dakota_in_data.m, dakota_in_write.m: 316 Implementation of linear constraints. 317 318 2009-04-17 10:20 jschierm 319 320 * src/m/classes/@dakota_method/: dakota_method.m, display.m, 321 dmeth_params_write.m: Implementation of linear constraints. 322 323 2009-04-17 09:27 jschierm 324 325 * src/m/classes/: @continuous_design/continuous_design.m, 326 @continuous_state/continuous_state.m, 327 @least_squares_term/least_squares_term.m, 328 @linear_equality_constraint/linear_equality_constraint.m, 329 @linear_inequality_constraint/linear_inequality_constraint.m, 330 @nonlinear_equality_constraint/nonlinear_equality_constraint.m, 331 @nonlinear_inequality_constraint/nonlinear_inequality_constraint.m, 332 @normal_uncertain/normal_uncertain.m, 333 @objective_function/objective_function.m, 334 @response_function/response_function.m: Change of method names 335 from dvar_ and dresp_ to prop_ 336 337 2009-04-16 14:46 morlighe 338 339 * src/m/classes/public/plot/plot_tensor_principalaxis.m: better way 340 of plotting principal axis 341 342 2009-04-16 12:12 morlighe 343 344 * src/m/classes/public/plot/: plot_tensor_components.m, 345 plot_tensor_principal.m, plot_tensor_principalaxis.m: better way 346 to plot principal axis 347 348 2009-04-16 12:06 seroussi 349 350 * test/Validation/EISMINT/MassConservation/runme.m: minor (wrong 351 name) 352 353 2009-04-16 12:05 seroussi 354 355 * test/Validation/EISMINT/MassConservation/CrossLine.exp: minor 356 357 2009-04-16 11:57 morlighe 358 359 * src/m/solutions/ice/StrainRateCompute.m: minor 360 361 2009-04-16 11:35 morlighe 362 363 * src/m/classes/public/plot/plot_tensor_principalaxis.m: Fixed bug 364 in principal axis plots 365 366 2009-04-16 11:08 morlighe 367 368 * src/m/classes/public/plot/: parse_options.m, plot_quiver.m, 369 plot_quiver3.m, plot_quivervel.m, plot_tensor_principalaxis.m, 370 plotdoc.m: Added density option for quiver plots (Thanks Ala) 371 372 2009-04-16 10:39 morlighe 373 374 * doc/website/doc_html/about.html: Minor 375 376 2009-04-16 08:56 seroussi 377 378 * src/m/classes/public/plot/plotdoc.m: wrong name of option 379 380 2009-04-16 07:19 morlighe 381 382 * startup.m: status variable can be cleared (not needed in matlab 383 workspace) 384 385 2009-04-16 07:16 morlighe 386 387 * src/m/classes/public/reorder.m: added mesh reordering (to be used 388 right after md=mesh( 389 390 2009-04-16 07:11 morlighe 391 392 * src/m/classes/public/plot/plot_dealer.m: minor (avoid error 393 message) 394 395 2009-04-15 16:33 morlighe 396 397 * doc/website/doc_html/: about.html, documentation.html: minor 398 399 2009-04-15 14:13 ala 400 401 * src/m/solutions/ice/StrainRateCompute.m: 1/a in principalvalues 402 of stainrate 403 404 2009-04-15 14:11 ala 405 406 * src/m/classes/public/solve.m: corrected typo problem 407 408 2009-04-15 07:30 morlighe 409 410 * src/m/classes/public/plot/plot_contour.m: no error in contour if 411 no contour found 412 413 2009-04-15 07:21 morlighe 414 415 * src/m/solutions/macayeal/macayealcontrol.m: no plots if 416 md.plot=0, use drawnow instead of pause(1) 417 418 2009-04-14 16:14 morlighe 419 420 * test/Validation/ISMIP/: README, TestA/README: Minor 421 422 2009-04-14 16:11 seroussi 423 424 * test/Validation/ISMIP/: README, description.pdf, results.pdf, 425 TestA/Front.exp, TestA/README, TestA/Square.par, TestA/runme.m, 426 TestB/Front.exp, TestB/README, TestB/Square.par, TestB/runme.m, 427 TestC/Front.exp, TestC/README, TestC/Square.par, TestC/runme.m, 428 TestD/Front.exp, TestD/README, TestD/Square.par, TestD/runme.m, 429 TestE/Front.exp, TestE/README, TestE/Square.par, TestE/data.mat, 430 TestE/data.txt, TestE/runme.m: added ISMIP_HOM tests 431 432 2009-04-10 13:32 morlighe 433 434 * contributors.txt: added photo source 435 436 2009-04-10 12:09 morlighe 437 438 * src/m/utils/Exp/manipulation/mergeprofiles.m: initialize tips 439 just in case 440 441 2009-04-10 12:05 morlighe 442 443 * src/m/utils/Exp/manipulation/mergeprofiles.m: Fixed bug again... 444 445 2009-04-10 11:43 morlighe 446 447 * src/m/utils/Exp/manipulation/: cutarea.m, mergeprofiles.m, 448 removeseveralpoints.m: Fixed some bugs 449 450 2009-04-10 10:52 morlighe 451 452 * src/m/utils/Exp/expmaster.m: some bugs remaining 453 454 2009-04-10 10:42 morlighe 455 456 * src/m/utils/Exp/manipulation/: addendprofile.m, 457 addinsideprofile.m, closeprofile.m, cutarea.m, cutprofile.m, 458 mergeprofiles.m, modifyposition.m, removepoints.m, 459 removeprofile.m, removeseveralpoints.m: Minor 460 461 2009-04-09 09:52 morlighe 462 463 * test/Validation/EISMINT/: README, description_EISMINT.pdf, 464 shelf-descr.pdf, Diagnostic1/README, Diagnostic1/runme.m, 465 Diagnostic2/README, Diagnostic2/runme.m, MassConservation/README, 466 MassConservation/runme.m, Transient/README, Transient/runme.m: 467 Minor 468 469 2009-04-09 09:40 seroussi 470 471 * test/Validation/EISMINT/: README, shelf-descr.pdf, 472 Diagnostic1/DomainOutline.exp, Diagnostic1/Front.exp, 473 Diagnostic1/README, Diagnostic1/Square.par, Diagnostic1/runme.m, 474 Diagnostic2/DomainOutline.exp, Diagnostic2/Front.exp, 475 Diagnostic2/README, Diagnostic2/Square.par, Diagnostic2/runme.m, 476 MassConservation/CrossLine.exp, 477 MassConservation/DomainOutline.exp, MassConservation/Front.exp, 478 MassConservation/README, MassConservation/Square.par, 479 MassConservation/runme.m, Transient/DomainOutline.exp, 480 Transient/Front.exp, Transient/README, Transient/Square.par, 481 Transient/runme.m: Added EISMINT test for MacAyeal and 482 prognostic2d 483 484 2009-04-09 07:50 morlighe 485 486 * doc/website/doc_c/: createchtmldoc.sh, layoutissm.xml: minor 487 changes 488 489 2009-04-09 07:37 morlighe 490 491 * src/m/utils/Mesh/: meshmaker.m, squaremesh.m: Improved squaremesh 492 493 2009-04-08 15:29 jschierm 494 495 * src/m/classes/: @linear_inequality_constraint/display.m, 496 @linear_inequality_constraint/linear_inequality_constraint.m, 497 @linear_equality_constraint/display.m, 498 @linear_equality_constraint/linear_equality_constraint.m: 499 Addition of linear constraint classes. 500 501 2009-04-08 14:55 morlighe 502 503 * src/m/classes/public/plot/processdata.m: this way it is better 504 505 2009-04-08 14:52 morlighe 506 507 * src/m/classes/public/plot/processdata.m: not needed 508 509 2009-04-08 14:49 morlighe 510 511 * src/m/classes/public/plot/processdata.m: minor 512 513 2009-04-08 14:23 seroussi 514 515 * src/m/utils/Mesh/meshmaker.m: better comments 516 517 2009-04-08 14:16 seroussi 518 519 * src/m/utils/Mesh/meshmaker.m: added meshmaker for structerated 520 sqaure mesh 521 522 2009-04-08 13:50 morlighe 523 524 * doc/website/doc_html/: about.html: typo 525 526 2009-04-08 13:35 morlighe 527 528 * src/m/classes/public/plot/plot_elementstype.m: fixed 529 plot_elementstype when Stokes... Matlab crashes with alpha on 530 patches now... 531 532 2009-04-08 11:55 jschierm 533 534 * src/m/utils/Array/item2str.m: Addition of error checking. 535 536 2009-04-08 11:51 morlighe 537 538 * doc/website/doc_c/: createchtmldoc.sh, doxygen.config, 539 layoutissm.xml: Added issmlayout 540 541 2009-04-08 11:32 jschierm 542 543 * src/m/classes/@dakota_method/: dakota_method.m, 544 dmeth_params_write.m: Addition of method-independent parameters 545 to dakota_method class. 546 547 2009-04-08 11:01 morlighe 548 549 * doc/website/doc_c/createchtmldoc.sh: doxygen tabs are nicer 550 551 2009-04-08 10:45 morlighe 552 553 * doc/website/doc_html/faq.html: minor 554 555 2009-04-08 10:09 morlighe 556 557 * doc/website/doc_html/: about.html, style.css: minor 558 559 2009-04-08 09:00 morlighe 560 561 * src/m/utils/Exp/: expmaster.m, manipulation/addcontour.m: Added 562 addcontour 563 564 2009-04-08 08:38 morlighe 565 566 * src/m/utils/Exp/expmaster.m: Fixed expmaster: now much much 567 faster thanks to getframe 568 569 2009-04-07 17:10 seroussi 570 571 * src/m/: classes/public/isresultconsistent.m, 572 solutions/ice/ModelProcessorDiagnosticHoriz.m: generalised mpcs 573 for periodic boundary conditions 574 575 2009-04-07 17:08 seroussi 576 577 * src/m/classes/public/: SectionValues.m, plot/plot_section.m: 578 Fixed Section plot 579 580 2009-04-07 16:53 morlighe 581 582 * src/m/classes/public/plot/plot_section.m: test fix section plot 583 584 2009-04-07 16:42 seroussi 585 586 * src/m/classes/public/SectionValues.m: to be continued 587 588 2009-04-07 16:39 morlighe 589 590 * doc/index.html: Minor 591 592 2009-04-07 16:07 morlighe 593 594 * doc/website/doc_html/style.css: improved menu 595 596 2009-04-07 15:48 morlighe 597 598 * doc/: index.html, website/doc_html/about.html, 599 website/doc_html/documentation.html, 600 website/doc_html/download.html, website/doc_html/faq.html, 601 website/doc_html/features.html, 602 website/doc_html/installation.html, website/doc_html/style.css, 603 website/doc_html/wiki.html: Minor 604 605 2009-04-07 15:07 jschierm 606 607 * src/m/solutions/dakota/: dakota_in_data.m, dakota_in_write.m, 608 dakota_m_write.m: Implementation of parameters in dakota_method 609 class 610 611 2009-04-07 14:45 jschierm 612 613 * src/m/classes/@dakota_method/: dakota_method.m, display.m, 614 dmeth_params_merge.m, dmeth_params_write.m: Addition of 615 method-dependent parameters into dakota_method class. 616 617 2009-04-07 14:33 morlighe 618 619 * src/m/classes/public/thicknessevolution.m: Accelerated 620 thicnessevolution 621 622 2009-04-07 14:30 morlighe 623 624 * doc/website/doc_html/: download.html, style.css: Added download 625 webpage 626 627 2009-04-07 14:17 seroussi 628 629 * src/m/classes/public/plot/applyoptions.m: minor 630 631 2009-04-07 14:04 seroussi 632 633 * src/m/classes/public/plot/plot_penalties.m: isnan returned an 634 empty matrix instead of a boolean 635 636 2009-04-07 13:59 seroussi 637 638 * src/m/classes/public/plot/applyoptions.m: minor 639 640 2009-04-07 13:21 morlighe 641 642 * doc/index.html: minor 643 644 2009-04-07 11:59 morlighe 645 646 * doc/: index.html, website/doc_html/about.html, 647 website/doc_html/documentation.html, 648 website/doc_html/download.html, website/doc_html/faq.html, 649 website/doc_html/features.html, 650 website/doc_html/installation.html, website/doc_html/style.css, 651 website/doc_html/wiki.html: Added About us webpage 652 653 2009-04-07 11:16 morlighe 654 655 * doc/: index.html, website/doc_html/installation.html, 656 website/doc_html/style.css: completed installation page 657 658 2009-04-07 10:49 seroussi 659 660 * src/m/classes/public/extrude.m: dirichlet value (thickness) for 661 prognostic must be same on each layer 662 663 2009-04-07 10:18 seroussi 664 665 * src/m/classes/public/plot/: plot_contour.m, processdata.m: fixed 666 contour for 3d meshes (Thank you Mathieu) 667 668 2009-04-07 10:03 seroussi 669 670 * src/m/classes/public/plot/applyoptions.m: minor typo 671 672 2009-04-07 09:16 morlighe 673 674 * doc/: index.html, website/doc_html/about.html, 675 website/doc_html/at_work.gif, 676 website/doc_html/documentation.html, 677 website/doc_html/download.html, website/doc_html/faq.html, 678 website/doc_html/features.html, 679 website/doc_html/installation.html, website/doc_html/wiki.html: 680 prepared some webpages 681 682 2009-04-07 08:38 morlighe 683 684 * src/m/classes/public/plot/: applyoptions.m, parse_options.m, 685 plot_basaldrag.m, plot_boundaries.m, plot_dealer.m, 686 plot_drivingstress.m, plot_elementnumbering.m, plot_quivervel.m, 687 plot_section.m, plot_tensor_components.m, 688 plot_tensor_principal.m, plot_tensor_principalaxis.m, 689 plot_transient_movie.m, plot_unit.m, plotmodel.m, processdata.m: 690 Split plot_unit into plot_dealer and plot_unit to be used by 691 other special plots. Example: plot_tensor_comp 300 lines -> 79 692 lines 693 694 2009-04-07 08:28 seroussi 695 696 * test/Validation/RoundIceSheet/: runme.m, Circ.par: to match 697 current version of the code 698 699 2009-04-06 15:04 seroussi 700 701 * src/m/solutions/ice/ModelProcessorPrognostic.m: added dirichlet 702 values for prognostic 703 704 2009-04-06 14:47 jschierm 705 706 * src/m/solutions/dakota/qmu.m: Commented-out MPI statement. 707 708 2009-04-06 14:44 jschierm 709 710 * src/m/solutions/dakota/dakota_in_write.m: Add the rest of the 711 Dakota methods. 712 713 2009-04-06 14:40 jschierm 714 715 * src/m/solutions/dakota/: dakota_in_data.m, dakota_in_params.m, 716 dakota_in_write.m, dakota_m_write.m: Implement dakota_method 717 class and add parametric study methods. 718 719 2009-04-06 11:55 jschierm 720 721 * src/m/solutions/dakota/dakota_in_write.m: Removed find_string.m 722 to separate utility. 723 724 2009-04-06 11:54 jschierm 725 726 * src/m/solutions/dakota/dakota_in_parse.m: Parse optimization 727 responses from Dakota .in file. 728 729 2009-04-06 11:52 jschierm 730 731 * src/m/solutions/dakota/dakota_in_write.m: Output response levels 732 only for nondeterministic methods. 733 734 2009-04-06 11:43 jschierm 735 736 * src/m/solutions/dakota/setupdesign/: QmuSetupDesign.m, 737 setuprhowater.m, setupgravity.m, setupheatcapacity.m, 738 setupthermalconductivity.m: Add 739 rho_water,heat_capacity,thermal_conductivity,and gravity to 740 setupdesign. 741 742 2009-04-06 11:36 jschierm 743 744 * src/m/classes/@dakota_method/: dakota_method.m, display.m: 745 Implement dakota_method class to externalize methods for Dakota. 746 747 2009-04-06 11:23 jschierm 748 749 * src/m/utils/Array/any2str.m: Utility to convert anything to a 750 string. 751 752 2009-04-06 11:21 jschierm 753 754 * src/m/utils/Array/find_string.m: Utility to find a string in a 755 cell array (from dakota_in_write.m). 756 757 2009-04-06 11:20 jschierm 758 759 * src/m/utils/Array/: item2str.m, string_cell.m, string_vec.m: More 760 (and revised) utilities for displaying arrays. 761 762 2009-04-06 10:29 morlighe 763 764 * src/m/solutions/dakota/: cielo_ice_script.sh, dakota_in_data.m, 765 dakota_in_params.m, dakota_in_parse.m, dakota_in_write.m, 766 dakota_m_write.m, dakota_out_parse.m, plot_boxplot.m, 767 plot_hist_norm.m, plot_if_bars.m, plot_normdist_bars.m, 768 plot_normplot.m, plot_prob_bars.m, plot_rlev_bars.m, 769 plot_sampdist_bars.m, qmu.m, qmuname.m, 770 responsefunctions/MaxAbsVx.m, responsefunctions/MaxAbsVy.m, 771 responsefunctions/MaxVel.m, responsefunctions/MaxVx.m, 772 responsefunctions/MaxVy.m, responsefunctions/MinVel.m, 773 responsefunctions/MinVx.m, responsefunctions/MinVy.m, 774 responsefunctions/QmuResponseValue.m, 775 setupdesign/QmuSetupDesign.m, setupdesign/setupdrag.m, 776 setupdesign/setuprhoice.m, setupdesign/setupriftsfriction.m, 777 setupdesign/setupthickness.m, 778 updatefunctions/QmuUpdateFunctions.m, 779 updatefunctions/updatedrag.m, updatefunctions/updategravity.m, 780 updatefunctions/updateheatcapacity.m, 781 updatefunctions/updaterho_ice.m, 782 updatefunctions/updaterho_water.m, 783 updatefunctions/updateriftsfriction.m, 784 updatefunctions/updatethermalconductivity.m, 785 updatefunctions/updatethickness.m: readded dakota 786 787 2009-04-06 08:40 morlighe 788 789 * doc/website/: doc_c/doxygenissm.css, doc_c/doxygenissm.css.bak, 790 doc_c/headerissm.html, doc_c/tabsissm.css, doc_html/style.css, 791 doc_m/template_issm/m2html.css: improved geneal layout (doc_c) 792 793 2009-04-03 17:40 seroussi 794 795 * src/m/classes/public/plot/plot_transient_movie.m: model neede in 796 apply_options 797 798 2009-04-03 17:38 morlighe 799 800 * doc/website/doc_m/template_issm/master.tpl: better master index 801 802 2009-04-03 17:31 seroussi 803 804 * src/m/utils/Nightly/nightlyrun.m: minor 805 806 2009-04-03 17:29 morlighe 807 808 * doc/website/doc_m/creatematlabhtmldoc.sh: Minor 809 810 2009-04-03 17:20 morlighe 811 812 * doc/website/: Makefile, doc_c/createchtmldoc.sh, 813 doc_c/doxygen.config, doc_c/doxygenissm.css, 814 doc_c/doxygenissm.css.bak, doc_c/footerissm.html, 815 doc_c/headerissm.html, doc_c/headerissm.png, doc_c/logo_JPL.png, 816 doc_c/logo_NASA.png, doc_c/tabsissm.css, 817 doc_html/documentation.html, doc_html/headerissm.png, 818 doc_html/logo_JPL.png, doc_html/logo_NASA.png, 819 doc_html/style.css, doc_m/creatematlabhtmldoc.sh, 820 doc_m/template_issm/alpha.png, doc_m/template_issm/c++.png, 821 doc_m/template_issm/c.png, doc_m/template_issm/demoicon.gif, 822 doc_m/template_issm/down.png, doc_m/template_issm/fortran.png, 823 doc_m/template_issm/graph.tpl, 824 doc_m/template_issm/headerissm.png, doc_m/template_issm/hp.png, 825 doc_m/template_issm/left.png, doc_m/template_issm/linux.png, 826 doc_m/template_issm/logo_JPL.png, 827 doc_m/template_issm/logo_NASA.png, 828 doc_m/template_issm/m2html.css, doc_m/template_issm/master.tpl, 829 doc_m/template_issm/matlabicon.gif, doc_m/template_issm/mdir.tpl, 830 doc_m/template_issm/mex.png, doc_m/template_issm/mfile.tpl, 831 doc_m/template_issm/right.png, doc_m/template_issm/sgi.png, 832 doc_m/template_issm/simulinkicon.gif, 833 doc_m/template_issm/solaris.png, doc_m/template_issm/todo.tpl, 834 doc_m/template_issm/up.png, doc_m/template_issm/windows.png, 835 doc_m/template_issm/template_issm2/alpha.png, 836 doc_m/template_issm/template_issm2/c++.png, 837 doc_m/template_issm/template_issm2/c.png, 838 doc_m/template_issm/template_issm2/demoicon.gif, 839 doc_m/template_issm/template_issm2/down.png, 840 doc_m/template_issm/template_issm2/fortran.png, 841 doc_m/template_issm/template_issm2/graph.tpl, 842 doc_m/template_issm/template_issm2/headerissm.png, 843 doc_m/template_issm/template_issm2/hp.png, 844 doc_m/template_issm/template_issm2/left.png, 845 doc_m/template_issm/template_issm2/linux.png, 846 doc_m/template_issm/template_issm2/logo_JPL.png, 847 doc_m/template_issm/template_issm2/logo_NASA.png, 848 doc_m/template_issm/template_issm2/m2html.css, 849 doc_m/template_issm/template_issm2/master.tpl, 850 doc_m/template_issm/template_issm2/matlabicon.gif, 851 doc_m/template_issm/template_issm2/mdir.tpl, 852 doc_m/template_issm/template_issm2/mex.png, 853 doc_m/template_issm/template_issm2/mfile.tpl, 854 doc_m/template_issm/template_issm2/right.png, 855 doc_m/template_issm/template_issm2/sgi.png, 856 doc_m/template_issm/template_issm2/simulinkicon.gif, 857 doc_m/template_issm/template_issm2/solaris.png, 858 doc_m/template_issm/template_issm2/todo.tpl, 859 doc_m/template_issm/template_issm2/up.png, 860 doc_m/template_issm/template_issm2/windows.png: Added website 861 862 2009-04-03 17:18 morlighe 863 864 * doc/developperguide.pdf: no more developerguide 865 866 2009-04-03 17:10 morlighe 867 868 * scripts/: archive.sh, createlinks.sh, eraselinks.sh, 869 quickinstall.sh: Added some files 870 871 2009-04-03 17:08 morlighe 872 873 * doc/index.html: Better documentation setup 874 875 2009-04-03 17:07 morlighe 876 877 * doc/MakefileIce: Missing doc target 878 879 2009-04-03 17:05 morlighe 880 881 * cron/linux_cronfile: New locations for cron jobs 882 883 2009-04-03 17:04 morlighe 884 885 * etc/cielo.rc: New cielo.rc settings. 886 887 2009-04-03 17:04 morlighe 888 889 * packages/list: Useless 890 891 2009-04-03 17:01 morlighe 892 893 * MakefileIce, bin/MakefileIce, bin/cvs_empty_file: Added bin clean 894 target 895 896 2009-04-03 16:59 morlighe 897 898 * src/mex/MeshPartition/MeshPartition.c: Switched to x code 899 framework 900 901 2009-04-03 16:56 morlighe 902 903 * src/c/MeshPartitionx/: MeshPartition.h, MeshPartitionx.c, 904 MeshPartitionx.h: MeshPartitionx: completed the x framework. 905 Some left over from Cielo. 906 907 2009-04-03 16:54 morlighe 908 909 * src/c/: ArgusContourToMeshx/MakefileIce, HoleFillerx/MakefileIce, 910 IceDataInterpx/MakefileIce, MeshPartitionx/MakefileIce, 911 Visux/MakefileIce: Fixed Bug 912 913 2009-04-03 16:51 morlighe 914 915 * ChangeLogIce: change log for Ice 916 917 2009-04-03 16:49 morlighe 918 919 * src/mex/ArgusContourToMesh/ArgusContourToMesh.c: reorg 920 921 2009-04-03 16:45 morlighe 922 923 * etc/environment.sh, etc/environment_variables, 924 src/c/ArgusContourToMeshx/ArgusContourToMeshx.c, 925 src/c/ArgusContourToMeshx/Contour.c, 926 src/c/ArgusContourToMeshx/Contour.h: reorg 927 928 2009-04-03 16:44 morlighe 929 930 * INSTALL, INSTALLICE: moved INSTALL to INSTALLICE 931 932 2009-04-03 16:43 morlighe 933 934 * README, READMEICE: moved REDME to READMEICE 935 936 2009-04-03 16:42 morlighe 937 938 * src/c/ArgusContourToMeshx/: ArgusContourToMesh.h, 939 ArgusContourToMeshx.h: reorg 940 941 2009-04-03 16:40 morlighe 942 943 * doc/Makefile, src/c/ArgusContourToMeshx/Makefile, 944 src/c/HoleFillerx/Makefile, src/c/IceDataInterpx/Makefile, 945 src/c/MeshPartitionx/Makefile, src/c/Visux/Makefile, 946 src/c/shared/TriMesh/Makefile: not needed anymore, automatically 947 generated by autoconf 948 949 2009-04-03 16:36 morlighe 950 951 * examples/Bumps/Bump1_surface_bed/DomainOutline.exp, 952 examples/Bumps/Bump1_surface_bed/Front.exp, 953 examples/Bumps/Bump1_surface_bed/Square.par, 954 examples/Bumps/Bump1_surface_bed/runme.m, 955 examples/Bumps/Bump2_bed/DomainOutline.exp, 956 examples/Bumps/Bump2_bed/Front.exp, 957 examples/Bumps/Bump2_bed/Square.par, 958 examples/Bumps/Bump2_bed/runme.m, 959 examples/SquareIceShelf/DomainOutline.exp, 960 examples/SquareIceShelf/Front.exp, 961 examples/SquareIceShelf/README, 962 examples/SquareIceShelf/Shelf.exp, 963 examples/SquareIceShelf/Square.par, 964 examples/SquareIceShelf/square.model, 965 test/Validation/MacAyealVsPattyn/test1_iceshelf/DomainOutline.exp, 966 test/Validation/MacAyealVsPattyn/test1_iceshelf/Front.exp, 967 test/Validation/MacAyealVsPattyn/test1_iceshelf/Pattyn.exp, 968 test/Validation/MacAyealVsPattyn/test1_iceshelf/Shelf.exp, 969 test/Validation/MacAyealVsPattyn/test1_iceshelf/Square.par, 970 test/Validation/MacAyealVsPattyn/test1_iceshelf/runme.m, 971 test/Validation/MacAyealVsPattyn/test2_icesheet/DomainOutline.exp, 972 test/Validation/MacAyealVsPattyn/test2_icesheet/Front.exp, 973 test/Validation/MacAyealVsPattyn/test2_icesheet/Pattyn.exp, 974 test/Validation/MacAyealVsPattyn/test2_icesheet/Square.par, 975 test/Validation/MacAyealVsPattyn/test2_icesheet/runme.m, 976 test/Validation/MacAyealVsPattyn/test3_icesheet_iceshelf/DomainOutline.exp, 977 test/Validation/MacAyealVsPattyn/test3_icesheet_iceshelf/Front.exp, 978 test/Validation/MacAyealVsPattyn/test3_icesheet_iceshelf/Pattyn.exp, 979 test/Validation/MacAyealVsPattyn/test3_icesheet_iceshelf/Shelf.exp, 980 test/Validation/MacAyealVsPattyn/test3_icesheet_iceshelf/Square.par, 981 test/Validation/MacAyealVsPattyn/test3_icesheet_iceshelf/runme.m, 982 test/Validation/PattynStokes/test1_iceshelf/DomainOutline.exp, 983 test/Validation/PattynStokes/test1_iceshelf/Front.exp, 984 test/Validation/PattynStokes/test1_iceshelf/Shelf.exp, 985 test/Validation/PattynStokes/test1_iceshelf/Square.par, 986 test/Validation/PattynStokes/test1_iceshelf/runme.m, 987 test/Validation/PattynStokes/test2_icesheet/DomainOutline.exp, 988 test/Validation/PattynStokes/test2_icesheet/Front.exp, 989 test/Validation/PattynStokes/test2_icesheet/Square.par, 990 test/Validation/PattynStokes/test2_icesheet/runme.m, 991 test/Validation/PattynStokes/test3_icesheet_iceshelf/DomainOutline.exp, 992 test/Validation/PattynStokes/test3_icesheet_iceshelf/Front.exp, 993 test/Validation/PattynStokes/test3_icesheet_iceshelf/Shelf.exp, 994 test/Validation/PattynStokes/test3_icesheet_iceshelf/Square.par, 995 test/Validation/PattynStokes/test3_icesheet_iceshelf/runme.m, 996 test/Validation/RoundIceSheet/Circ.par, 997 test/Validation/RoundIceSheet/CreateDomainOutline.m, 998 test/Validation/RoundIceSheet/README, 999 test/Validation/RoundIceSheet/runme.m, 1000 test/Validation/ThermalTests/Melting/DomainOutline.exp, 1001 test/Validation/ThermalTests/Melting/Front.exp, 1002 test/Validation/ThermalTests/Melting/Square.par, 1003 test/Validation/ThermalTests/Melting/runme.m, 1004 test/Validation/ThermalTests/Melting/thermalboundarycondition.m, 1005 test/Validation/ThermalTests/Simpleadvection/DomainOutline.exp, 1006 test/Validation/ThermalTests/Simpleadvection/Front.exp, 1007 test/Validation/ThermalTests/Simpleadvection/Square.par, 1008 test/Validation/ThermalTests/Simpleadvection/runme.m, 1009 test/Validation/ThermalTests/Simpleadvection/thermalboundarycondition.m, 1010 test/Validation/ThermalTests/Simpleconduction/DomainOutline.exp, 1011 test/Validation/ThermalTests/Simpleconduction/Front.exp, 1012 test/Validation/ThermalTests/Simpleconduction/Shelf.exp, 1013 test/Validation/ThermalTests/Simpleconduction/Square.par, 1014 test/Validation/ThermalTests/Simpleconduction/runme.m, 1015 test/Validation/ThermalTests/Simpleconduction/thermalboundarycondition.m, 1016 test/Validation/ThermalTests/Simplegeothermalflux/DomainOutline.exp, 1017 test/Validation/ThermalTests/Simplegeothermalflux/Front.exp, 1018 test/Validation/ThermalTests/Simplegeothermalflux/Square.par, 1019 test/Validation/ThermalTests/Simplegeothermalflux/runme.m, 1020 test/Validation/ThermalTests/Simplegeothermalflux/thermalboundarycondition.m, 1021 test/Verification/test10_iceshelf_icefront_stokes/DomainOutline.exp, 1022 test/Verification/test10_iceshelf_icefront_stokes/Front.exp, 1023 test/Verification/test10_iceshelf_icefront_stokes/Square.par, 1024 test/Verification/test10_iceshelf_icefront_stokes/archive_melting.mat, 1025 test/Verification/test10_iceshelf_icefront_stokes/archive_stokes.mat, 1026 test/Verification/test10_iceshelf_icefront_stokes/archive_temperature.mat, 1027 test/Verification/test10_iceshelf_icefront_stokes/runme.m, 1028 test/Verification/test10_iceshelf_icefront_stokes/updatearchive.m, 1029 test/Verification/test11_penalties_iceshelf_allmodels/DomainOutline.exp, 1030 test/Verification/test11_penalties_iceshelf_allmodels/Front.exp, 1031 test/Verification/test11_penalties_iceshelf_allmodels/Pattyn.exp, 1032 test/Verification/test11_penalties_iceshelf_allmodels/Square.par, 1033 test/Verification/test11_penalties_iceshelf_allmodels/Stokes.exp, 1034 test/Verification/test11_penalties_iceshelf_allmodels/archive_melting.mat, 1035 test/Verification/test11_penalties_iceshelf_allmodels/archive_temperature.mat, 1036 test/Verification/test11_penalties_iceshelf_allmodels/archive_velocity.mat, 1037 test/Verification/test11_penalties_iceshelf_allmodels/runme.m, 1038 test/Verification/test11_penalties_iceshelf_allmodels/updatearchive.m, 1039 test/Verification/test1_icesheet_noicefront/DomainOutline.exp, 1040 test/Verification/test1_icesheet_noicefront/Front.exp, 1041 test/Verification/test1_icesheet_noicefront/Square.par, 1042 test/Verification/test1_icesheet_noicefront/archive_acc.mat, 1043 test/Verification/test1_icesheet_noicefront/archive_hutter.mat, 1044 test/Verification/test1_icesheet_noicefront/archive_ice.mat, 1045 test/Verification/test1_icesheet_noicefront/archive_macayeal.mat, 1046 test/Verification/test1_icesheet_noicefront/runme.m, 1047 test/Verification/test1_icesheet_noicefront/updatearchive.m, 1048 test/Verification/test2_icesheet_icefront/DomainOutline.exp, 1049 test/Verification/test2_icesheet_icefront/Front.exp, 1050 test/Verification/test2_icesheet_icefront/Hutter.exp, 1051 test/Verification/test2_icesheet_icefront/Square.par, 1052 test/Verification/test2_icesheet_icefront/archive_acc.mat, 1053 test/Verification/test2_icesheet_icefront/archive_hutter.mat, 1054 test/Verification/test2_icesheet_icefront/archive_ice.mat, 1055 test/Verification/test2_icesheet_icefront/archive_macayeal.mat, 1056 test/Verification/test2_icesheet_icefront/archive_thickness.mat, 1057 test/Verification/test2_icesheet_icefront/runme.m, 1058 test/Verification/test2_icesheet_icefront/updatearchive.m, 1059 test/Verification/test3_iceshelf_icefront/DomainOutline.exp, 1060 test/Verification/test3_iceshelf_icefront/Front.exp, 1061 test/Verification/test3_iceshelf_icefront/Square.par, 1062 test/Verification/test3_iceshelf_icefront/archive_acc.mat, 1063 test/Verification/test3_iceshelf_icefront/archive_ice.mat, 1064 test/Verification/test3_iceshelf_icefront/archive_macayeal.mat, 1065 test/Verification/test3_iceshelf_icefront/archive_thickness.mat, 1066 test/Verification/test3_iceshelf_icefront/runme.m, 1067 test/Verification/test3_iceshelf_icefront/updatearchive.m, 1068 test/Verification/test4_icesheet_noicefront_3d/DomainOutline.exp, 1069 test/Verification/test4_icesheet_noicefront_3d/Front.exp, 1070 test/Verification/test4_icesheet_noicefront_3d/Square.par, 1071 test/Verification/test4_icesheet_noicefront_3d/archive_hutter.mat, 1072 test/Verification/test4_icesheet_noicefront_3d/archive_melting.mat, 1073 test/Verification/test4_icesheet_noicefront_3d/archive_pattyn.mat, 1074 test/Verification/test4_icesheet_noicefront_3d/archive_temperature.mat, 1075 test/Verification/test4_icesheet_noicefront_3d/runme.m, 1076 test/Verification/test4_icesheet_noicefront_3d/updatearchive.m, 1077 test/Verification/test5_icesheet_icefront_3d/DomainOutline.exp, 1078 test/Verification/test5_icesheet_icefront_3d/Front.exp, 1079 test/Verification/test5_icesheet_icefront_3d/Square.par, 1080 test/Verification/test5_icesheet_icefront_3d/archive_melting.mat, 1081 test/Verification/test5_icesheet_icefront_3d/archive_melting_transient.mat, 1082 test/Verification/test5_icesheet_icefront_3d/archive_pattyn.mat, 1083 test/Verification/test5_icesheet_icefront_3d/archive_temperature.mat, 1084 test/Verification/test5_icesheet_icefront_3d/archive_temperature_transient.mat, 1085 test/Verification/test5_icesheet_icefront_3d/archive_thickness.mat, 1086 test/Verification/test5_icesheet_icefront_3d/runme.m, 1087 test/Verification/test5_icesheet_icefront_3d/updatearchive.m, 1088 test/Verification/test6_iceshelf_icefront_3d/DomainOutline.exp, 1089 test/Verification/test6_iceshelf_icefront_3d/Front.exp, 1090 test/Verification/test6_iceshelf_icefront_3d/Square.par, 1091 test/Verification/test6_iceshelf_icefront_3d/archive_melting.mat, 1092 test/Verification/test6_iceshelf_icefront_3d/archive_melting_transient.mat, 1093 test/Verification/test6_iceshelf_icefront_3d/archive_pattyn.mat, 1094 test/Verification/test6_iceshelf_icefront_3d/archive_temperature.mat, 1095 test/Verification/test6_iceshelf_icefront_3d/archive_temperature_transient.mat, 1096 test/Verification/test6_iceshelf_icefront_3d/archive_thickness.mat, 1097 test/Verification/test6_iceshelf_icefront_3d/runme.m, 1098 test/Verification/test6_iceshelf_icefront_3d/updatearchive.m, 1099 test/Verification/test7_penalties_iceshelf_3d/DomainOutline.exp, 1100 test/Verification/test7_penalties_iceshelf_3d/Front.exp, 1101 test/Verification/test7_penalties_iceshelf_3d/Pattyn.exp, 1102 test/Verification/test7_penalties_iceshelf_3d/Square.par, 1103 test/Verification/test7_penalties_iceshelf_3d/archive_melting.mat, 1104 test/Verification/test7_penalties_iceshelf_3d/archive_temperature.mat, 1105 test/Verification/test7_penalties_iceshelf_3d/archive_velocity.mat, 1106 test/Verification/test7_penalties_iceshelf_3d/iceshelf.exp, 1107 test/Verification/test7_penalties_iceshelf_3d/runme.m, 1108 test/Verification/test7_penalties_iceshelf_3d/updatearchive.m, 1109 test/Verification/test8_icesheet_noicefront_stokes/DomainOutline.exp, 1110 test/Verification/test8_icesheet_noicefront_stokes/Front.exp, 1111 test/Verification/test8_icesheet_noicefront_stokes/Square.par, 1112 test/Verification/test8_icesheet_noicefront_stokes/archive_melting.mat, 1113 test/Verification/test8_icesheet_noicefront_stokes/archive_stokes.mat, 1114 test/Verification/test8_icesheet_noicefront_stokes/archive_temperature.mat, 1115 test/Verification/test8_icesheet_noicefront_stokes/runme.m, 1116 test/Verification/test8_icesheet_noicefront_stokes/updatearchive.m, 1117 test/Verification/test9_icesheet_icefront_stokes/DomainOutline.exp, 1118 test/Verification/test9_icesheet_icefront_stokes/Front.exp, 1119 test/Verification/test9_icesheet_icefront_stokes/Square.par, 1120 test/Verification/test9_icesheet_icefront_stokes/archive_melting.mat, 1121 test/Verification/test9_icesheet_icefront_stokes/archive_stokes.mat, 1122 test/Verification/test9_icesheet_icefront_stokes/archive_temperature.mat, 1123 test/Verification/test9_icesheet_icefront_stokes/runme.m, 1124 test/Verification/test9_icesheet_icefront_stokes/updatearchive.m, 1125 test/Verification/test_cielo/DomainOutline.exp, 1126 test/Verification/test_cielo/DomainOutlineRifts.exp, 1127 test/Verification/test_cielo/Front.exp, 1128 test/Verification/test_cielo/IceShelf.exp, 1129 test/Verification/test_cielo/Pattyn.exp, 1130 test/Verification/test_cielo/Rifts.exp, 1131 test/Verification/test_cielo/Square.par, 1132 test/Verification/test_cielo/control.mat, 1133 test/Verification/test_cielo/diagnostic_horiz_macayeal.mat, 1134 test/Verification/test_cielo/diagnostic_horiz_mixed.mat, 1135 test/Verification/test_cielo/diagnostic_horiz_pattyn.mat, 1136 test/Verification/test_cielo/diagnostic_horiz_rifts.mat, 1137 test/Verification/test_cielo/runme.m, 1138 test/Verification/test_cielo/thermalsteady.mat: Moved tests to 1139 test and examples 1140 1141 2009-04-03 16:27 morlighe 1142 1143 * packages/: Makefile, README, list, dakota/Dakota_4_2.src.tar.gz, 1144 dakota/install.sh, doxygen/doxygen-1.5.8.src.tar.gz, 1145 doxygen/install.sh, gdal/GDALmake.opt.patch, 1146 gdal/gdal-1.6.0.tar.gz, gdal/install.sh, m2html/install.sh, 1147 m2html/m2html.m.patch, m2html/m2html.zip, 1148 metis/Makefile.in.patch, metis/install.sh, 1149 metis/metis-4.0.tar.gz, mpich2/Examples.Makefile.patch, 1150 mpich2/install.sh, mpich2/mpich2-1.0.2p1.tar.gz, mtoc/install.sh, 1151 mtoc/mtoc.tgz, petsc/install.sh, petsc/petsc-2.3.2-p3.tar.gz, 1152 qhull/install.sh, qhull/qhull-2003.1.tar.gz, slepc/install.sh, 1153 slepc/slepc-2.3.2.tgz, sowing/install.sh, sowing/sowing.tar.gz, 1154 suitesparse/SuiteSparse-3.2.0.tar.gz, 1155 suitesparse/SuiteSparse_install.patch, suitesparse/install.sh, 1156 triangle/install.sh, triangle/makefile, 1157 triangle/triangle.c.patch, triangle/triangle.zip: moved libs to 1158 packages 1159 1160 2009-04-03 16:21 morlighe 1161 1162 * contributors.txt: blabla 1163 1164 2009-04-03 16:10 morlighe 1165 1166 * src/m/classes/: @pentaelem/CreateKMatrix.mexa64, 1167 @pentaelem/CreatePVector.mexa64, @triaelem/CreateKMatrix.mexa64: 1168 Not needed 1169 1170 2009-04-03 16:08 morlighe 1171 1172 * bin/cvs_empty_file: empty file needed 1173 1174 2009-04-03 16:05 morlighe 1175 1176 * cron/nightlyrun.sh, doc/issmdoc.m, etc/Make_default_rules.mk, 1177 etc/config_linux64.mk, startup.m, bin/startup.m: reorg 1178 1179 2009-04-03 16:01 morlighe 1180 1181 * Makefile.issm: gone 1182 1183 2009-04-03 16:00 morlighe 1184 1185 * src/m/shared/: GaussPenta.m, GaussQuad.m, GaussSegment.m, 1186 GaussTetra.m, GaussTria.m, Getalpha2.m, Solver.m, hutterenum.m, 1187 macayealenum.m, noneenum.m, pattynenum.m, recover_input.m, 1188 stokesenum.m: reorg 1189 1190 2009-04-03 15:55 morlighe 1191 1192 * src/m/: classes/@acceleratedtriaelem/CreateKMatrix.m, 1193 classes/@acceleratedtriaelem/CreatePVector.m, 1194 classes/@acceleratedtriaelem/acceleratedtriaelem.m, 1195 classes/@acceleratedtriaelem/display.m, 1196 classes/@acceleratedtriaelem/subsasgn.m, 1197 classes/@acceleratedtriaelem/subsref.m, 1198 classes/@beamelem/CreateKMatrix.m, 1199 classes/@beamelem/CreatePVector.m, 1200 classes/@beamelem/GetJacobian.m, 1201 classes/@beamelem/GetJacobianDeterminant.m, 1202 classes/@beamelem/GetJacobianInvert.m, 1203 classes/@beamelem/GetNodalFunctions.m, 1204 classes/@beamelem/GetNodalFunctionsDerivativesBasic.m, 1205 classes/@beamelem/GetNodalFunctionsDerivativesParams.m, 1206 classes/@beamelem/GetParameterValue.m, 1207 classes/@beamelem/beamelem.m, classes/@beamelem/display.m, 1208 classes/@beamelem/getgriddata.m, classes/@beamelem/subsasgn.m, 1209 classes/@beamelem/subsref.m, 1210 classes/@continuous_design/continuous_design.m, 1211 classes/@continuous_design/display.m, 1212 classes/@continuous_state/continuous_state.m, 1213 classes/@continuous_state/display.m, 1214 classes/@elemmatrix/AddElemMatrix.m, 1215 classes/@elemmatrix/display.m, classes/@elemmatrix/elemmatrix.m, 1216 classes/@elemmatrix/subsasgn.m, classes/@elemmatrix/subsref.m, 1217 classes/@elemvector/AddElemVector.m, 1218 classes/@elemvector/display.m, classes/@elemvector/elemvector.m, 1219 classes/@elemvector/subsasgn.m, classes/@elemvector/subsref.m, 1220 classes/@globalmatrix/AddElemMatrix.m, 1221 classes/@globalmatrix/display.m, 1222 classes/@globalmatrix/globalmatrix.m, 1223 classes/@globalmatrix/subsasgn.m, 1224 classes/@globalmatrix/subsref.m, 1225 classes/@globalvector/AddElemVector.m, 1226 classes/@globalvector/display.m, 1227 classes/@globalvector/globalvector.m, 1228 classes/@globalvector/subsasgn.m, 1229 classes/@globalvector/subsref.m, 1230 classes/@icefront/CreatePVector.m, 1231 classes/@icefront/PenaltyConstrain.m, 1232 classes/@icefront/PenaltyCreateKMatrix.m, 1233 classes/@icefront/PenaltyCreatePVector.m, 1234 classes/@icefront/display.m, classes/@icefront/icefront.m, 1235 classes/@icefront/subsasgn.m, classes/@icefront/subsref.m, 1236 classes/@least_squares_term/display.m, 1237 classes/@least_squares_term/least_squares_term.m, 1238 classes/@matice/GetViscosity2.m, 1239 classes/@matice/GetViscosity2d.m, 1240 classes/@matice/GetViscosity3d.m, classes/@matice/display.m, 1241 classes/@matice/matice.m, classes/@matice/subsasgn.m, 1242 classes/@matice/subsref.m, classes/@matpar/display.m, 1243 classes/@matpar/matpar.m, classes/@matpar/subsasgn.m, 1244 classes/@matpar/subsref.m, classes/@model/activaterepository.m, 1245 classes/@model/deletemodel.m, classes/@model/display.m, 1246 classes/@model/fieldcount.m, classes/@model/get.m, 1247 classes/@model/model.m, classes/@model/set.m, 1248 classes/@model/structtomodel.m, classes/@model/subsasgn.m, 1249 classes/@model/subsref.m, classes/@node/display.m, 1250 classes/@node/node.m, classes/@node/subsasgn.m, 1251 classes/@node/subsref.m, 1252 classes/@nonlinear_equality_constraint/display.m, 1253 classes/@nonlinear_equality_constraint/nonlinear_equality_constraint.m, 1254 classes/@nonlinear_inequality_constraint/display.m, 1255 classes/@nonlinear_inequality_constraint/nonlinear_inequality_constraint.m, 1256 classes/@normal_uncertain/display.m, 1257 classes/@normal_uncertain/normal_uncertain.m, 1258 classes/@objective_function/display.m, 1259 classes/@objective_function/objective_function.m, 1260 classes/@pengrid/CreatePVector.m, 1261 classes/@pengrid/PenaltyConstrain.m, 1262 classes/@pengrid/PenaltyCreateKMatrix.m, 1263 classes/@pengrid/PenaltyCreatePVector.m, 1264 classes/@pengrid/display.m, classes/@pengrid/pengrid.m, 1265 classes/@pengrid/subsasgn.m, classes/@pengrid/subsref.m, 1266 classes/@penpair/CreatePVector.m, 1267 classes/@penpair/PenaltyConstrain.m, 1268 classes/@penpair/PenaltyCreateKMatrix.m, 1269 classes/@penpair/PenaltyCreatePVector.m, 1270 classes/@penpair/display.m, classes/@penpair/penpair.m, 1271 classes/@penpair/subsasgn.m, classes/@penpair/subsref.m, 1272 classes/@pentaelem/CreateKMatrix.m, 1273 classes/@pentaelem/CreateKMatrix.mexa64, 1274 classes/@pentaelem/CreatePVector.m, 1275 classes/@pentaelem/CreatePVector.mexa64, 1276 classes/@pentaelem/DeviatoricStress.m, 1277 classes/@pentaelem/GetBStokes.m, classes/@pentaelem/GetB_advec.m, 1278 classes/@pentaelem/GetB_conduct.m, 1279 classes/@pentaelem/GetB_horiz.m, classes/@pentaelem/GetB_vert.m, 1280 classes/@pentaelem/GetBprimeStokes.m, 1281 classes/@pentaelem/GetBprime_advec.m, 1282 classes/@pentaelem/GetBprime_horiz.m, 1283 classes/@pentaelem/GetBprime_vert.m, 1284 classes/@pentaelem/GetJacobian.m, 1285 classes/@pentaelem/GetJacobianDeterminant.m, 1286 classes/@pentaelem/GetJacobianInvert.m, 1287 classes/@pentaelem/GetNodalFunctions.m, 1288 classes/@pentaelem/GetNodalFunctionsBubbleStokes.m, 1289 classes/@pentaelem/GetNodalFunctionsDerivativesBasic.m, 1290 classes/@pentaelem/GetNodalFunctionsDerivativesBasicStokes.m, 1291 classes/@pentaelem/GetNodalFunctionsDerivativesParams.m, 1292 classes/@pentaelem/GetNodalFunctionsDerivativesParamsStokes.m, 1293 classes/@pentaelem/GetNodalFunctionsStokes.m, 1294 classes/@pentaelem/GetParameterDerivativeValue.m, 1295 classes/@pentaelem/GetParameterValue.m, 1296 classes/@pentaelem/GetParameterValueStokes.m, 1297 classes/@pentaelem/GetStrainRate.m, 1298 classes/@pentaelem/GetStrainRateStokes.m, 1299 classes/@pentaelem/PentaCollapseIntoTriaMatrix.m, 1300 classes/@pentaelem/PentaCollapseIntoTriaVector.m, 1301 classes/@pentaelem/ReduceMatrixStokes.m, 1302 classes/@pentaelem/ReduceVectorStokes.m, 1303 classes/@pentaelem/StrainRate.m, classes/@pentaelem/Stress.m, 1304 classes/@pentaelem/StressBed.m, 1305 classes/@pentaelem/StressSurface.m, 1306 classes/@pentaelem/ViscousHeating.m, 1307 classes/@pentaelem/display.m, classes/@pentaelem/getgriddata.m, 1308 classes/@pentaelem/pentaelem.m, classes/@pentaelem/subsasgn.m, 1309 classes/@pentaelem/subsref.m, 1310 classes/@response_function/display.m, 1311 classes/@response_function/response_function.m, 1312 classes/@rgb/display.m, classes/@rgb/rgb.m, 1313 classes/@rgb/subsasgn.m, classes/@rgb/subsref.m, 1314 classes/@singelem/CreateKMatrix.m, 1315 classes/@singelem/CreatePVector.m, classes/@singelem/display.m, 1316 classes/@singelem/singelem.m, classes/@singelem/subsasgn.m, 1317 classes/@singelem/subsref.m, classes/@spc/display.m, 1318 classes/@spc/spc.m, classes/@spc/subsasgn.m, 1319 classes/@spc/subsref.m, classes/@tetraelem/GetJacobian.m, 1320 classes/@tetraelem/GetJacobianDeterminant.m, 1321 classes/@triaelem/CreateKMatrix.m, 1322 classes/@triaelem/CreateKMatrix.mexa64, 1323 classes/@triaelem/CreatePVector.m, 1324 classes/@triaelem/DeviatoricStress.m, classes/@triaelem/GetB.m, 1325 classes/@triaelem/GetB_prog.m, classes/@triaelem/GetBprime.m, 1326 classes/@triaelem/GetBprime_prog.m, 1327 classes/@triaelem/GetJacobian.m, 1328 classes/@triaelem/GetJacobianDeterminant.m, 1329 classes/@triaelem/GetJacobianInvert.m, classes/@triaelem/GetL.m, 1330 classes/@triaelem/GetLStokes.m, 1331 classes/@triaelem/GetLprimeStokes.m, 1332 classes/@triaelem/GetNodalFunctions.m, 1333 classes/@triaelem/GetNodalFunctionsDerivativesBasic.m, 1334 classes/@triaelem/GetNodalFunctionsDerivativesParams.m, 1335 classes/@triaelem/GetParameterDerivativeValue.m, 1336 classes/@triaelem/GetParameterValue.m, 1337 classes/@triaelem/GetStrainRate.m, 1338 classes/@triaelem/StrainRate.m, classes/@triaelem/Stress.m, 1339 classes/@triaelem/ViscousHeating.m, classes/@triaelem/display.m, 1340 classes/@triaelem/getgriddata.m, classes/@triaelem/subsasgn.m, 1341 classes/@triaelem/subsref.m, classes/@triaelem/triaelem.m, 1342 classes/public/BuildQueueingScript.m, 1343 classes/public/BuildQueueingScriptGeneric.m, 1344 classes/public/BuildQueueingScriptcosmos.m, 1345 classes/public/BuildQueueingScriptgemini.m, 1346 classes/public/DepthAverage.m, classes/public/LaunchQueueJob.m, 1347 classes/public/LaunchQueueJobGeneric.m, 1348 classes/public/LaunchQueueJobcosmos.m, 1349 classes/public/LaunchQueueJobgemini.m, 1350 classes/public/QueueJobPeek.m, 1351 classes/public/QueueJobPeekGeneric.m, classes/public/README, 1352 classes/public/ReadData.m, classes/public/SectionValues.m, 1353 classes/public/ThicknessCorrection.m, classes/public/WriteData.m, 1354 classes/public/addnote.m, classes/public/area.m, 1355 classes/public/averageconnectivity.m, classes/public/averaging.m, 1356 classes/public/balvel.m, classes/public/basalstress.m, 1357 classes/public/basevert.m, classes/public/buildoverlay.m, 1358 classes/public/buildoverlaycolorbar.m, classes/public/collapse.m, 1359 classes/public/deepcopy.m, classes/public/displaybc.m, 1360 classes/public/displaycontrol.m, classes/public/displayexppar.m, 1361 classes/public/displaymaterials.m, classes/public/displaymesh.m, 1362 classes/public/displayobservations.m, 1363 classes/public/displayparallel.m, 1364 classes/public/displayparameters.m, classes/public/displayqmu.m, 1365 classes/public/displayresults.m, 1366 classes/public/displaysolutionparameters.m, 1367 classes/public/domaintomesh.m, classes/public/drivingstress.m, 1368 classes/public/export.m, classes/public/extrude.m, 1369 classes/public/fieldcount.m, classes/public/geography.m, 1370 classes/public/ismodelselfconsistent.m, 1371 classes/public/isresultconsistent.m, 1372 classes/public/loadresultsfromcluster.m, 1373 classes/public/loadresultsfromdisk.m, classes/public/marshall.m, 1374 classes/public/mesh.m, classes/public/mesh2.m, 1375 classes/public/meshadaptation.m, classes/public/meshexprefine.m, 1376 classes/public/meshprocessrifts.m, classes/public/meshrefine.m, 1377 classes/public/model2ocmodel.m, classes/public/modelextract.m, 1378 classes/public/modelzoom.m, classes/public/parameterize.m, 1379 classes/public/parseresultsfromdisk.m, classes/public/peek.m, 1380 classes/public/plug.m, classes/public/preparerun.m, 1381 classes/public/printmodel.m, classes/public/project2d.m, 1382 classes/public/project3d.m, classes/public/radarpower.m, 1383 classes/public/recover_areas.m, classes/public/removeholes.m, 1384 classes/public/rifttipsrefine.m, 1385 classes/public/setelementstype.m, classes/public/shear2d.m, 1386 classes/public/shearnorm2d.m, classes/public/slope.m, 1387 classes/public/solve.m, 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classes/public/plot/plot_overlay.m, 1409 classes/public/plot/plot_penalties.m, 1410 classes/public/plot/plot_quiver.m, 1411 classes/public/plot/plot_quiver3.m, 1412 classes/public/plot/plot_quivervel.m, 1413 classes/public/plot/plot_riftpenetration.m, 1414 classes/public/plot/plot_riftrelvel.m, 1415 classes/public/plot/plot_riftvel.m, 1416 classes/public/plot/plot_sarpwr.m, 1417 classes/public/plot/plot_section.m, 1418 classes/public/plot/plot_segmentnumbering.m, 1419 classes/public/plot/plot_segmentonneumann.m, 1420 classes/public/plot/plot_tensor.m, 1421 classes/public/plot/plot_tensor_components.m, 1422 classes/public/plot/plot_tensor_principal.m, 1423 classes/public/plot/plot_tensor_principalaxis.m, 1424 classes/public/plot/plot_thermaltransient_results.m, 1425 classes/public/plot/plot_transient_movie.m, 1426 classes/public/plot/plot_transient_results.m, 1427 classes/public/plot/plot_unit.m, 1428 classes/public/plot/plotanalyse.m, classes/public/plot/plotdoc.m, 1429 classes/public/plot/plotmodel.m, 1430 classes/public/plot/processdata.m, 1431 classes/public/plot/processmesh.m, 1432 classes/public/plot/recover_plot_options.m, 1433 classes/public/plot/scaleruler.m, classes/public/plot/undoplot.m, 1434 solutions/ice/BuildGridSets.m, solutions/ice/CreateFemModel.m, 1435 solutions/ice/DeviatoricStressCompute.m, 1436 solutions/ice/DiagnosticSolutionType.m, solutions/ice/Dof.m, 1437 solutions/ice/GetNumberOfActiveElements.m, 1438 solutions/ice/HorizontalVelocityDepthAverage.m, 1439 solutions/ice/IceNormalizeconstraints.m, 1440 solutions/ice/IcePenaltyConstraints.m, 1441 solutions/ice/IceReducematrix.m, 1442 solutions/ice/IceReducematrixfromgtof.m, 1443 solutions/ice/IceReducerightside.m, solutions/ice/Loadresults.m, 1444 solutions/ice/Mergesolution_g.m, solutions/ice/ModelProcessor.m, 1445 solutions/ice/ModelProcessorDiagnosticBaseVert.m, 1446 solutions/ice/ModelProcessorDiagnosticHoriz.m, 1447 solutions/ice/ModelProcessorDiagnosticHutter.m, 1448 solutions/ice/ModelProcessorDiagnosticStokes.m, 1449 solutions/ice/ModelProcessorDiagnosticVert.m, 1450 solutions/ice/ModelProcessorMelting.m, 1451 solutions/ice/ModelProcessorPrognostic.m, 1452 solutions/ice/ModelProcessorSlopeCompute.m, 1453 solutions/ice/ModelProcessorThermal.m, solutions/ice/MpcGrids.m, 1454 solutions/ice/PartitioningVector.m, 1455 solutions/ice/PenaltySystemMatrices.m, 1456 solutions/ice/PressureElemCompute.m, 1457 solutions/ice/Reducevector_g.m, 1458 solutions/ice/SetStructureField.m, solutions/ice/SetupParams.m, 1459 solutions/ice/ShiftLayers.m, solutions/ice/SpcGrids.m, 1460 solutions/ice/StrainRateCompute.m, 1461 solutions/ice/StressBedCompute.m, solutions/ice/StressCompute.m, 1462 solutions/ice/StressSurfaceCompute.m, 1463 solutions/ice/SystemMatrices.m, solutions/ice/TimeStepping.m, 1464 solutions/ice/UpdateGeometry.m, 1465 solutions/ice/UpdateGridPosition.m, solutions/ice/UpdateMesh.m, 1466 solutions/ice/VelocityExtrude.m, 1467 solutions/ice/ViscousHeatingCompute.m, solutions/ice/debug.m, 1468 solutions/ice/debug2.m, solutions/ice/getdofcount.m, 1469 solutions/ice/huttercompute.m, solutions/ice/icediagnostic.m, 1470 solutions/ice/icediagnostic2d.m, solutions/ice/icediagnostic3d.m, 1471 solutions/ice/icediagnostic_core_linear.m, 1472 solutions/ice/icediagnostic_core_nonlinear.m, 1473 solutions/ice/icediagnostic_wrapper.m, solutions/ice/iceglobal.m, 1474 solutions/ice/icemelting_core.m, solutions/ice/iceparameters.m, 1475 solutions/ice/iceparameters_wrapper.m, 1476 solutions/ice/iceprognostic.m, 1477 solutions/ice/iceprognostic_core.m, 1478 solutions/ice/iceprognostic_wrapper.m, 1479 solutions/ice/icethermal.m, solutions/ice/icethermal_core.m, 1480 solutions/ice/icethermal_wrapper.m, solutions/ice/icetransient.m, 1481 solutions/ice/icetransient2d.m, solutions/ice/icetransient3d.m, 1482 solutions/ice/icetransient_wrapper.m, 1483 solutions/ice/slopecompute.m, solutions/macayeal/bar_maker.m, 1484 solutions/macayeal/buildicefrontnormal.m, 1485 solutions/macayeal/c_velfinder.m, 1486 solutions/macayeal/create_el2nod_matrices.m, 1487 solutions/macayeal/flowlaw.m, solutions/macayeal/grad_J_flow.m, 1488 solutions/macayeal/macayealcontrol.m, 1489 solutions/macayeal/macayealdiagnostic.m, 1490 solutions/macayeal/objectivefunction_C_flow.m, 1491 solutions/macayeal/setup_control.m, solutions/macayeal/shape.m, 1492 solutions/macayeal/shear.m, solutions/macayeal/stress.m, 1493 solutions/macayeal/visc_grad.m, solutions/macayeal/viscosity.m, 1494 utils/genpath_ice.m, utils/Antarctica/README, 1495 utils/Antarctica/antcreatewrappedmap.m, 1496 utils/Antarctica/antimread.m, 1497 utils/Antarctica/antlatlonoverlay.m, utils/Antarctica/antmovie.m, 1498 utils/Antarctica/antoutline.m, utils/Antarctica/antoverlay.m, 1499 utils/Antarctica/antoverlay2.m, utils/Antarctica/antscale.m, 1500 utils/Antarctica/antzoom.m, utils/Array/allempty.m, 1501 utils/Array/allnan.m, utils/Array/string_dim.m, 1502 utils/Array/string_vec.m, utils/Cluster/clusterreq.m, 1503 utils/Computation/runtime.m, 1504 utils/Computation/sparsity_compute.m, 1505 utils/Cracks/contour_icefront.m, utils/Cracks/contour_maker.m, 1506 utils/Cracks/exist_by_names.m, utils/Cracks/find_around.m, 1507 utils/Cracks/find_coord.m, utils/Cracks/find_coord_matrix.m, 1508 utils/Cracks/find_line.m, utils/Cracks/icefront_maker.m, 1509 utils/Cracks/index_builder.m, utils/Cracks/index_builder2.m, 1510 utils/Cracks/locate.m, utils/Cracks/margin_locator.m, 1511 utils/Cracks/mesh_creator_2d.m, utils/Cracks/meshdensitygen.m, 1512 utils/Cracks/names_function.m, utils/Cracks/perim_curve.m, 1513 utils/Cracks/void_fill.m, utils/Cracks/void_fill1d.m, 1514 utils/Cracks/void_fill_noxy.m, utils/DataProcessing/addtrack.m, 1515 utils/DataProcessing/data_processing_tool.fig, 1516 utils/DataProcessing/data_processing_tool.m, utils/Err/erfn.m, 1517 utils/Err/erfp.m, utils/Exp/expboxgen.m, 1518 utils/Exp/expconcatenate.m, utils/Exp/expcreatecircle.m, 1519 utils/Exp/expcreatecontour.m, utils/Exp/expcreateprofile.m, 1520 utils/Exp/expcut.m, utils/Exp/expdisp.m, utils/Exp/expdoc.m, 1521 utils/Exp/expgen.m, utils/Exp/explink.m, utils/Exp/expmaster.m, 1522 utils/Exp/expselect.m, utils/Exp/ginputquick.m, 1523 utils/Exp/zinput.m, utils/Exp/manipulation/addendprofile.m, 1524 utils/Exp/manipulation/addinsideprofile.m, 1525 utils/Exp/manipulation/addprofile.m, 1526 utils/Exp/manipulation/closeprofile.m, 1527 utils/Exp/manipulation/closestpoint.m, 1528 utils/Exp/manipulation/closestsegment.m, 1529 utils/Exp/manipulation/cutarea.m, 1530 utils/Exp/manipulation/cutprofile.m, 1531 utils/Exp/manipulation/mergeprofiles.m, 1532 utils/Exp/manipulation/modifyposition.m, 1533 utils/Exp/manipulation/removepoints.m, 1534 utils/Exp/manipulation/removeprofile.m, 1535 utils/Exp/manipulation/removeseveralpoints.m, 1536 utils/Exp/manipulation/undoplots.m, 1537 utils/Exp/readwrite/expread.m, utils/Exp/readwrite/expwrite.m, 1538 utils/Exp/readwrite/expwriteasvertices.m, 1539 utils/Exp/readwrite/newline.m, utils/Exp/readwrite/put_file.m, 1540 utils/Exp/readwrite/read_file.m, utils/Exp/readwrite/readfile.m, 1541 utils/Exp/readwrite/readline.m, utils/Exp/readwrite/writefile.m, 1542 utils/Find/locate.m, utils/Geometry/SegIntersect.m, 1543 utils/Geometry/find_point.m, utils/Hulls/inhull.m, 1544 utils/Hulls/insidehull.m, utils/Hulls/interval.m, 1545 utils/Hulls/intsecl.m, utils/Hulls/intsecpl.m, 1546 utils/Hulls/iscross.m, utils/Hulls/isinpoly.m, 1547 utils/Hulls/isinpolylarge.m, utils/Hulls/ispolygon.m, 1548 utils/Hulls/linechk.m, utils/ImageProcessing/gradient_perso.m, 1549 utils/ImageProcessing/im_resize.m, 1550 utils/ImageProcessing/mean_congrid.m, 1551 utils/ImageProcessing/rebin.m, 1552 utils/Interp/griddata_grid_to_mesh.m, 1553 utils/Interp/griddata_grid_to_mesh_completer.m, 1554 utils/Interp/griddata_grid_to_mesh_nan.m, 1555 utils/Interp/griddata_mesh_to_grid.m, 1556 utils/Interp/griddata_mesh_to_mesh.m, 1557 utils/Interp/griddata_mesh_to_mesh_3d.m, 1558 utils/Interp/griddata_nearest.m, 1559 utils/Interp/griddata_nearest_matrix.m, 1560 utils/Interp/griddata_nearest_nan.m, 1561 utils/Interp/griddata_nearest_vector.m, 1562 utils/Interp/griddata_perso.m, utils/LatLong/ll2xy.m, 1563 utils/LatLong/mapll.m, utils/LatLong/mapxy.m, 1564 utils/LatLong/xyscale_south.m, utils/Math/fixdec.m, 1565 utils/Meca/effective_value.m, utils/Meca/glen_coefficients.m, 1566 utils/Meca/lithostaticpressure.m, utils/Meca/paterson.m, 1567 utils/Meca/tau_principal.m, utils/Mesh/BuildAdaptedMesh.m, 1568 utils/Miscellaneous/create_region.m, 1569 utils/Miscellaneous/findarg.m, utils/Miscellaneous/round_ice.m, 1570 utils/Model/ProcessParallelParametersFromCieloRc.m, 1571 utils/Model/loadmodel.m, utils/Nightly/nightlyrun.m, 1572 utils/Nightly/nightlyruncielo.m, utils/Plot/squarezoom.m, 1573 utils/Shell/issmdir.m, utils/Sound/beep_ice.m, 1574 utils/String/discardnum.m, utils/String/logoutput.m, 1575 utils/String/strsplit.m, utils/UpdateArchive/updatearchive.m, 1576 utils/Visu/plot_results.m, utils/Visu/twofig.m, utils/Visu/vi.m, 1577 utils/Visu/vic.m, utils/Visu/vii.m, utils/Visu/vim.m, 1578 utils/Visu/vim3.m: reorg 1579 1580 2009-04-03 15:43 morlighe 1581 1582 * src/: c/MakefileIce, perl/DiagnosticAlter.pl: reorg 1583 1584 2009-04-03 15:42 morlighe 1585 1586 * src/c/shared/: MakefileIce, Exp/IsInPoly.c, Ice/Contour.c, 1587 Ice/Contour.h, Ice/CreateElemMatrix.c, Ice/CreateElemVector.c, 1588 Ice/GaussPenta.c, Ice/GaussSegment.c, Ice/GaussTria.c, 1589 Ice/GetBFromTemperature.c, Ice/GetParameterList.c, 1590 Ice/Getalpha2FromFrictionParameters.c, Ice/Ice.h, 1591 Ice/MatrixUtils.c, Ice/SetDofs.c, Ice/SharedPentaElem.c, 1592 Ice/SharedTriaElem.c, Ice/getgriddata.c, Ice/recover_input.c: Big 1593 reorg 1594 1595 2009-04-03 15:39 morlighe 1596 1597 * src/mex/MakefileIce: big reorg 1598 1599 2009-04-03 15:37 morlighe 1600 1601 * src/mex/: ArgusContourToMesh/ArgusContourToMesh.m, 1602 ArgusContourToMesh/Makefile, DataInterp/DataInterp.m, 1603 DataInterp/Makefile, HoleFiller/Makefile, MeshPartition/Makefile, 1604 SetStructureField/Makefile, 1605 SetStructureField/SetStructureField.c, 1606 SetStructureField/SetStructureField.h, TriMesh/Makefile, 1607 TriMeshProcessRifts/Makefile, TriMeshRefine/Makefile, 1608 Visu/Makefile, pentaelem/CreateKMatrix.c, 1609 pentaelem/CreateKMatrix.h, pentaelem/CreatePVector.c, 1610 pentaelem/CreatePVector.h, pentaelem/Makefile, 1611 triaelem/CreateKMatrix.c, triaelem/CreateKMatrix.h, 1612 triaelem/Makefile: Big Reorg 1613 1614 2009-04-03 15:29 morlighe 1615 1616 * src/c/shared/sharedice.h: Missing file 1617 1618 2009-03-18 12:06 larour 1619 1620 * MakefileIce: diverse. 1621 1622 2009-03-18 12:05 larour 1623 1624 * MakefileIce: Moved Makefile to MakefileIce 1625 1626 2009-03-18 12:04 larour 1627 1628 * src/MakefileIce: Missing links 1629 1630 2009-03-18 12:02 larour 1631 1632 * src/c/: MakefileIce, ArgusContourToMeshx/ArgusContourToMesh.h, 1633 ArgusContourToMeshx/ArgusContourToMeshx.c, 1634 ArgusContourToMeshx/Contour.c, ArgusContourToMeshx/Contour.h, 1635 ArgusContourToMeshx/Makefile, HoleFillerx/HoleFiller.h, 1636 HoleFillerx/HoleFillerCrippen.c, HoleFillerx/HoleFillerx.c, 1637 HoleFillerx/Makefile, IceDataInterpx/DataInterp.h, 1638 IceDataInterpx/DataInterpx.c, IceDataInterpx/Makefile, 1639 MeshPartitionx/Makefile, MeshPartitionx/MeshPartition.h, 1640 MeshPartitionx/MeshPartitionx.c, Visux/Makefile, Visux/Visu.h, 1641 Visux/Visux.c, shared/MakefileIce, shared/Exp/ExpIce.h, 1642 shared/TriMesh/TriMesh.h: x code taken out of modules 1643 1644 2009-03-18 11:57 larour 1645 1646 * src/mex/: DataInterp/DataInterp.c, DataInterp/DataInterp.h, 1647 DataInterp/DataInterpx.c, DataInterp/Makefile, 1648 HoleFiller/HoleFiller.c, MeshPartition/MeshPartition.c: Wrong 1649 header files 1650 1651 2009-03-18 11:53 larour 1652 1653 * src/mex/: ArgusContourToMesh/ArgusContourToMesh.c, 1654 ArgusContourToMesh/ArgusContourToMesh.h, 1655 ArgusContourToMesh/ArgusContourToMeshx.c, 1656 ArgusContourToMesh/Contour.c, ArgusContourToMesh/Contour.h, 1657 ArgusContourToMesh/IsInPoly.c, ArgusContourToMesh/Makefile, 1658 HoleFiller/HoleFiller.h, HoleFiller/HoleFillerCrippen.c, 1659 HoleFiller/HoleFillerx.c, HoleFiller/Makefile, 1660 MeshPartition/Makefile, MeshPartition/MeshPartition.h, 1661 MeshPartition/MeshPartitionx.c, TriMesh/TriMesh.c, 1662 TriMeshProcessRifts/TriMeshProcessRifts.c, 1663 TriMeshRefine/TriMeshRefine.c, Visu/Makefile, Visu/Visu.c, 1664 Visu/Visu.h, Visu/Visux.c: Took out x code layer 1665 1666 2009-03-18 11:06 larour 1667 1668 * etc/config_linux64.mk: [no log message] 1669 1670 2009-03-18 11:05 larour 1671 1672 * etc/config_linux64.mk: Replaced ICE by ISSM_DIR 1673 1674 2009-03-18 10:56 larour 1675 1676 * src/c/shared/TriMesh/GridInsideHole.c: minor. 1677 1678 2009-03-18 10:38 morlighe 1679 1680 * scripts/archive.sh: fixed archive.sh 1681 1682 2009-03-18 10:37 larour 1683 1684 * src/MakefileIce: Moved Makefile.issm to MakefileIce 1685 1686 2009-03-18 10:36 larour 1687 1688 * src/mex/: Makefile, MakefileIce: Moved Makefile to MakefileIce 1689 1690 2009-03-18 10:35 larour 1691 1692 * src/mex/: TriMesh/Makefile, TriMesh/TriMesh.c, 1693 TriMeshProcessRifts/Makefile, 1694 TriMeshProcessRifts/TriMeshProcessRifts.c, 1695 TriMeshRefine/Makefile, TriMeshRefine/TriMeshRefine.c: Now 1696 references sharedice.a library. 1697 1698 2009-03-18 10:32 larour 1699 1700 * src/c/shared/: MakefileIce, Exp/DomainOutlineReadIce.c, 1701 Exp/ExpIce.h, TriMesh/AssociateSegmentToElement.c, 1702 TriMesh/GridInsideHole.c, TriMesh/Makefile, 1703 TriMesh/OrderSegments.c, TriMesh/SplitMeshForRifts.c, 1704 TriMesh/TriMesh.h, TriMesh/TriMeshUtils.c: Shared is not in 1705 shared/ 1706 1707 2009-03-18 10:32 morlighe 1708 1709 * archive.sh: moved to scripts 1710 1711 2009-03-18 08:31 larour 1712 1713 * install.sh: Gone baby gone... Niac niac. 1714 1715 2009-03-18 08:25 larour 1716 1717 * mailinglist, cron/mailinglist: Gone to cron 1718 1719 2009-03-18 08:23 larour 1720 1721 * todo: Gone to Trash 1722 1723 2009-03-18 08:23 larour 1724 1725 * startup.m, bin/startup.m: Moved to bin 1726 1727 2009-03-18 08:09 larour 1728 1729 * startup.m: issmdir could not be found! (thanks Mathieu!) 1730 1731 2009-03-18 08:03 larour 1732 1733 * scripts/archive.sh: Moved from root directory 1734 1735 2009-03-18 07:50 larour 1736 1737 * cron/linux_cronfile: Updated Cron to cron 1738 1739 2009-03-18 07:41 larour 1740 1741 * etc/environment_variables: Replaced Libs by libs. 1742 1743 2009-03-18 07:21 larour 1744 1745 * src/pro/: bytscl.m, plot_cielo.pro: From Utils to pro/ for Idl 1746 utils 1747 1748 2009-03-18 07:14 larour 1749 1750 * src/mex/: Makefile, ArgusContourToMesh/ArgusContourToMesh.c, 1751 ArgusContourToMesh/ArgusContourToMesh.h, 1752 ArgusContourToMesh/ArgusContourToMesh.m, 1753 ArgusContourToMesh/ArgusContourToMeshx.c, 1754 ArgusContourToMesh/Contour.c, ArgusContourToMesh/Contour.h, 1755 ArgusContourToMesh/IsInPoly.c, ArgusContourToMesh/Makefile, 1756 DataInterp/DataInterp.c, DataInterp/DataInterp.h, 1757 DataInterp/DataInterp.m, DataInterp/DataInterpx.c, 1758 DataInterp/Makefile, HoleFiller/HoleFiller.c, 1759 HoleFiller/HoleFiller.h, HoleFiller/HoleFillerCrippen.c, 1760 HoleFiller/HoleFillerx.c, HoleFiller/Makefile, 1761 MeshPartition/Makefile, MeshPartition/MeshPartition.c, 1762 MeshPartition/MeshPartition.h, MeshPartition/MeshPartitionx.c, 1763 TriMesh/Makefile, TriMesh/TriMesh.c, 1764 TriMeshProcessRifts/Makefile, 1765 TriMeshProcessRifts/TriMeshProcessRifts.c, 1766 TriMeshRefine/Makefile, TriMeshRefine/TriMeshRefine.c, 1767 Visu/Makefile, Visu/Visu.c, Visu/Visu.h, Visu/Visux.c: 1768 Modifications to run in new directory 1769 1770 2009-03-18 06:57 larour 1771 1772 * etc/: config_linux32.mk, config_linux64.mk, config_mac.mk, 1773 mexopts_v5.sh, mexopts_v76.sh: New path etc/ to mex options file. 1774 1775 2009-03-18 06:52 larour 1776 1777 * etc/environment.sh: New path to config. 1778 1779 2009-03-18 06:45 larour 1780 1781 * doc/: Makefile, developperguide.pdf, theoryguide.pdf, 1782 userguide.pdf, theoryguide/Algorithm.png, 1783 theoryguide/Assembly.png, theoryguide/MINI.png, 1784 theoryguide/Makefile, theoryguide/TpmpMb.png, 1785 theoryguide/accumulation.png, theoryguide/barycentric_penta.png, 1786 theoryguide/barycentric_tria.png, theoryguide/bilanmass.png, 1787 theoryguide/friction_geometry.png, theoryguide/friction_kin.png, 1788 theoryguide/geometry3D.png, theoryguide/melting.png, 1789 theoryguide/meshpenalty.png, theoryguide/penalized_vel_2.png, 1790 theoryguide/penalized_vel_3.png, theoryguide/penalties1.png, 1791 theoryguide/pentaelem.png, theoryguide/prog1.png, 1792 theoryguide/prog2.png, theoryguide/progi.png, 1793 theoryguide/quadelem.png, theoryguide/schema1.png, 1794 theoryguide/schema4.png, theoryguide/schema5.png, 1795 theoryguide/segment.png, theoryguide/tetraelem.png, 1796 theoryguide/theoryguide.tex, theoryguide/thermal_loop.png, 1797 theoryguide/triaelem.png, userguide/Amery.png, 1798 userguide/Antarctica.png, userguide/Makefile, 1799 userguide/argus.png, userguide/argus_DO.png, 1800 userguide/argus_Front.png, userguide/argus_GL.png, 1801 userguide/argus_Islands.png, userguide/argus_map.png, 1802 userguide/contour.png, userguide/layers.png, 1803 userguide/userguide.tex: Moved Doc to doc 1804 1805 2009-03-18 06:42 larour 1806 1807 * cron/: README, ice.sh, killingforeign.sh, linux_cronfile, 1808 nightlyrun.sh, tag.sh, testingforeign.sh: Moved Cron to cron 1809 1810 2009-03-18 05:46 larour 1811 1812 * etc/: Make_default_rules.mk, README, cielo.rc, config_linux32.mk, 1813 config_linux64.mk, config_mac.mk, environment.sh, 1814 environment_variables, mexopts_mac.sh, mexopts_v5.sh, 1815 mexopts_v651.sh, mexopts_v704.sh, mexopts_v76.sh: Moved Etc to 1816 etc 1817 1818 2009-03-17 18:56 larour 1819 1820 * Makefile, Makefile.issm: Moved Makefile to Makefile.issm to make 1821 room for Cielo makefile. 1822 1823 2009-03-17 18:04 larour 1824 1825 * README: Diverse 1826 1827 2009-03-17 18:02 larour 1828 1829 * INSTALL, README: some info 1830 1831 2009-03-17 17:57 larour 1832 1833 * startup.m: More elegant way to recove ISSM_DIR 1834 1835 2009-03-17 14:32 larour 1836 1837 * test/test.m: Gone: ignore 1838 1839 2009-03-17 14:29 larour 1840 1841 * test/test.m: test dir: ignore 1842 1843 2009-03-17 14:28 larour 1844 1845 * test.m: test: ignore 1846 1847 2009-03-17 14:23 larour 1848 1849 * test.m: test: ignore 1850 1851 2009-03-17 13:59 larour 1852 1853 * startup.m: SUITESPARSE moved to Libs/suitesparse 1854 1855 2009-03-17 13:58 larour 1856 1857 * Makefile: Took out doxygen doc, now in Doc/developperguide/ 1858 makefile. 1859 1860 2009-03-17 13:56 larour 1861 1862 * doxygen.config: c html doc using doxygen, and matlab html doc 1863 using m2html 1864 1865 2009-03-17 12:08 morlighe 1866 1867 * install.sh: metis is needed by MeshPartition module 1868 1869 2009-03-17 11:55 morlighe 1870 1871 * install.sh: Added compilation of triangle 1872 1873 2009-03-17 11:48 morlighe 1874 1875 * install.sh: Added an install.sh file to check that .bashrc is 1876 correclty configured and automated compilation 1877 1878 2009-03-17 08:13 larour 1879 1880 * README: How to get ISSM to work 1881 1882 2009-03-17 08:12 larour 1883 1884 * startup.m: Simpler startup file. 1885 1886 2009-03-17 08:10 larour 1887 1888 * install.sh: Not needed anymore 1889 1890 2009-03-17 07:41 larour 1891 1892 * Makefile: New modules framework 1893 1894 2009-03-17 07:41 larour 1895 1896 * archive.sh: Naming 1897 1898 2009-03-13 16:39 larour 1899 1900 * doxygen.config: Automatic documentation generation. 1901 1902 2009-03-13 11:09 morlighe 1903 1904 * contributors.txt: added IsInpoly.c contrib 1905 1906 2009-03-13 09:48 morlighe 1907 1908 * contributors.txt: not used anymore 1909 1910 2009-03-11 17:06 morlighe 1911 1912 * contributors.txt: updated contributors 1913 1914 2009-03-05 12:22 morlighe 1915 1916 * install.sh: change startup file first 1917 1918 2009-03-02 16:40 morlighe 1919 1920 * startup.m: simplified startup.m with genpath_ice 1921 1922 2009-03-02 09:43 larour 1923 1924 * startup.m: Added dakota directories. 1925 1926 2009-02-28 21:55 larour 1927 1928 * startup.m: Added responsefunctions 1929 1930 2009-02-24 10:07 morlighe 1931 1932 * install.sh: Added get number of CPUs and removes make -j 8 for 1933 the first make (compilation fails) 1934 1935 2009-02-23 15:49 larour 1936 1937 * startup.m: Added Gdal path. 1938 1939 2009-02-23 15:49 larour 1940 1941 * Makefile, install.sh: Include Gdal compilation. 1942 1943 2009-02-17 13:53 morlighe 1944 1945 * startup.m: minor 1946 1947 2009-02-17 13:52 morlighe 1948 1949 * todo: [no log message] 1950 1951 2009-02-17 13:52 morlighe 1952 1953 * startup.m: Added missing directories in path 1954 1955 2009-02-17 13:51 morlighe 1956 1957 * Makefile: Added HoleFiller, and Public target 1958 1959 2009-02-17 12:51 larour 1960 1961 * todo: [no log message] 1962 1963 2009-02-17 12:50 larour 1964 1965 * startup.m: Added missing directories in path 1966 1967 2009-02-17 12:49 larour 1968 1969 * Makefile: Added HoleFiller, and Public target 1970 1971 2009-02-11 10:52 morlighe 1972 1973 * todo: test 1974 1975 2009-02-10 15:32 larour 1976 1977 * todo: Test4 1978 1979 2009-02-10 15:31 larour 1980 1981 * todo: Test 3 1982 1983 2009-02-10 15:21 larour 1984 1985 * todo: test 1986 1987 2009-02-09 10:08 morlighe 1988 1989 * contributors.txt: minor 1990 1991 2009-02-06 12:11 morlighe 1992 1993 * startup.m: Added HoleFiller Path 1994 1995 2009-02-06 09:28 morlighe 1996 1997 * install.sh: Added a script to install everything automatically 1998 1999 2009-02-05 17:41 morlighe 2000 2001 * todo: as usual 2002 2003 2009-02-05 17:12 morlighe 2004 2005 * startup.m: bad startup 2006 2007 2009-02-05 16:50 larour 2008 2009 * contributors.txt, startup.m, todo: Cleanup solutions 2010 2011 2009-02-03 07:51 morlighe 2012 2013 * startup.m: plot must be added to startup file 2014 2015 2009-02-02 08:15 larour 2016 2017 * todo: Mathieu? 2018 2019 2009-01-27 09:30 larour 2020 2021 * contributors.txt: Added contributors list 2022 2023 2009-01-27 09:28 larour 2024 2025 * Makefile: Added HoleFiller module 2026 2027 2009-01-20 14:53 ala 2028 2029 * mailinglist: Added Ala's email address. 2030 2031 2009-01-20 07:25 morlighe 2032 2033 * startup.m: new path is needed for cielo 2034 2035 2009-01-20 07:09 larour 2036 2037 * mailinglist: Test, ignore 2038 2039 2009-01-19 14:14 larour 2040 2041 * mailinglist: Test of VCS commit. Ignore. 2042 2043 2009-01-19 14:14 larour 2044 2045 * mailinglist: Test of VCS commit. Ignore 2046 2047 2009-01-19 11:05 larour 2048 2049 * Makefile: Replaced path to config from MexConfig to Etc 2050 2051 2008-12-30 08:45 morlighe 2052 2053 * todo: Added some missing stuff from previous ice1 2054 2055 2008-12-29 11:54 larour 2056 2057 * startup.m, todo: Some missing stuff from ice2 2058 2059 2008-12-29 09:23 seroussi 2060 2061 * startup.m: Not needed 2062 2063 2008-12-29 09:04 seroussi 2064 2065 * startup.m: test 2066 2067 2008-12-29 08:16 morlighe 2068 2069 * todo: as usual 2070 2071 2008-12-24 10:39 morlighe 2072 2073 * startup.m: antepenultimate test 2074 2075 2008-12-24 10:28 morlighe 2076 2077 * startup.m: back 2078 2079 2008-12-24 10:16 morlighe 2080 2081 * startup.m: check nightly run 2082 2083 2008-12-24 10:13 seroussi 2084 2085 * mailinglist: removed change 2086 2087 2008-12-24 07:40 seroussi 2088 2089 * mailinglist: to fix nightly runs and avoid 100 mails 2090 2091 2008-12-22 09:27 morlighe 2092 2093 * todo: as usual 2094 2095 2008-12-22 07:36 morlighe 2096 2097 * todo: as usual 2098 2099 2008-12-05 11:33 morlighe 2100 2101 * todo: commit to be done later 2102 2103 2008-11-18 13:55 morlighe 2104 2105 * todo: as usual 2106 2107 2008-10-21 14:14 morlighe 2108 2109 * todo: as usual 2110 2111 2008-10-14 09:02 morlighe 2112 2113 * todo: as usual 2114 2115 2008-10-13 08:11 morlighe 2116 2117 * todo: as usual 2118 2119 2008-10-13 08:03 morlighe 2120 2121 * todo: as usual 2122 2123 2008-09-29 13:22 morlighe 2124 2125 * todo: as usual 2126 2127 2008-09-26 16:55 larour 2128 2129 * startup.m: Added model to startup 2130 2131 2008-09-26 10:16 morlighe 2132 2133 * todo: as usual 2134 2135 2008-09-25 16:01 morlighe 2136 2137 * todo: as usual 2138 2139 2008-09-25 09:30 seroussi 2140 2141 * todo: as usual 2142 2143 2008-09-24 13:07 morlighe 2144 2145 * todo: as usual 2146 2147 2008-09-24 10:52 larour 2148 2149 * todo: Simplified diagnostic solution 2150 2151 2008-09-16 15:59 morlighe 2152 2153 * todo: as usual 2154 2155 2008-09-15 12:30 morlighe 2156 2157 * todo: as usual 2158 2159 2008-09-10 17:06 morlighe 2160 2161 * todo: to do tomorrow 2162 2163 2008-09-10 16:57 morlighe 2164 2165 * todo: as usual 2166 2167 2008-09-09 15:57 morlighe 2168 2169 * todo: as usual 2170 2171 2008-09-09 13:31 morlighe 2172 2173 * todo: ice shelf basal velocity -> fixed 2174 2175 2008-09-09 11:46 morlighe 2176 2177 * todo: As usual 2178 2179 2008-09-09 07:46 morlighe 2180 2181 * todo: as usual 2182 2183 2008-09-08 17:35 morlighe 2184 2185 * todo: Good luck! 2186 2187 2008-09-08 09:23 seroussi 2188 2189 * startup.m: minor 2190 2191 2008-09-08 09:22 seroussi 2192 2193 * startup.m: simplified projections project3d 2194 2195 2008-09-08 08:38 morlighe 2196 2197 * todo: as usual 2198 2199 2008-09-05 16:31 larour 2200 2201 * todo: as usual 2202 2203 2008-09-05 15:53 larour 2204 2205 * todo: Improved transient and steady state thermal solution 2206 2207 2008-09-04 14:21 morlighe 2208 2209 * todo: as usual 2210 2211 2008-09-04 11:53 morlighe 2212 2213 * todo: As usual 2214 2215 2008-09-03 16:56 morlighe 2216 2217 * todo: As usual 2218 2219 2008-09-03 12:23 larour 2220 2221 * todo: Important 2222 2223 2008-09-03 09:21 morlighe 2224 2225 * todo: as usual 2226 2227 2008-09-02 16:38 larour 2228 2229 * todo: New transient solution 2230 2231 2008-09-02 13:08 larour 2232 2233 * todo: New penalty approach to computation of melting in thermal 2234 solution 2235 2236 2008-09-02 09:20 larour 2237 2238 * todo: As usual 2239 2240 2008-08-30 07:12 larour 2241 2242 * todo: As usual 2243 2244 2008-08-29 10:19 larour 2245 2246 * todo: as usual 2247 2248 2008-08-28 17:05 seroussi 2249 2250 * todo: updated todo 2251 2252 2008-08-27 13:36 larour 2253 2254 * todo: Implemented basal vertical velocity solution. Started 2255 thermal solution 2256 2257 2008-08-26 17:10 larour 2258 2259 * todo: as usual 2260 2261 2008-08-26 14:44 larour 2262 2263 * todo: Implemented and fixed bugs in vertical solution 2264 2265 2008-08-26 10:54 larour 2266 2267 * todo: Implemented new 2d-3d modeling. Extended computations of 2268 velocities vertically 2269 2270 2008-08-26 10:52 larour 2271 2272 * startup.m: Better path 2273 2274 2008-08-25 09:54 larour 2275 2276 * startup.m: Took out the startup error 2277 2278 2008-08-24 14:39 larour 2279 2280 * todo: as usual 2281 2282 2008-08-21 17:42 larour 2283 2284 * startup.m: New startup 2285 2286 2008-08-21 17:38 larour 2287 2288 * mailinglist: Added mailing list 2289 2290 2008-08-07 10:39 morlighe 2291 2292 * startup.m: oups... 2293 2294 2008-08-07 10:37 morlighe 2295 2296 * startup.m: Added a new field md.visualization. If 1: 2297 visualization of each iteration results in icecontrol 2298 2299 2008-08-01 23:36 larour 2300 2301 * todo: As usual 2302 2303 2008-08-01 12:09 larour 2304 2305 * startup.m: Public/ 2306 2307 2008-07-31 14:08 morlighe 2308 2309 * startup.m: Same convention for MacAyealdiagnostic and control 2310 (2nu -> nu) 2311 2312 2008-07-25 17:10 larour 2313 2314 * todo: As usual 2315 2316 2008-07-25 11:35 larour 2317 2318 * Makefile, todo: Added Makefiles to compiled shared and objects in 2319 'c' code 2320 2321 2008-07-23 08:28 larour 2322 2323 * startup.m, todo: Missing MeshPartition path 2324 2325 2008-07-21 15:11 larour 2326 2327 * Makefile: Addedd MeshPartition module. 2328 2329 2008-07-03 22:05 larour 2330 2331 * todo: As usual 2332 2333 2008-07-01 11:12 larour 2334 2335 * todo: Added cronjob capabilities 2336 2337 2008-06-30 14:50 seroussi 2338 2339 * todo: Updated todo 2340 2341 2008-06-30 11:40 larour 2342 2343 * Makefile: Separated Doc target from all target 2344 2345 2008-06-26 16:17 larour 2346 2347 * startup.m: Added DataInterp to path 2348 2349 2008-06-26 16:10 larour 2350 2351 * Makefile: Added DataInterp target 2352 2353 2008-06-17 11:06 larour 2354 2355 * Makefile: Added top level Makefile to drive overall compilation 2356 2357 2008-06-12 14:44 larour 2358 2359 * startup.m: Added ArgusContourToMesh module, to run with 2360 parameterize.m 2361 2362 2008-06-04 10:11 seroussi 2363 2364 * todo: Update todo 2365 2366 2008-06-03 16:40 larour 2367 2368 * todo: Some more things to do. 2369 2370 2008-06-03 16:40 larour 2371 2372 * startup.m: Took out objects from the ICE path, as the @grid class 2373 interferes with the graph2d/grid.m routine. 2374 2375 2008-06-03 11:54 larour 2376 2377 * todo: Todo 2378 2379 2008-06-03 10:43 larour 2380 2381 * archive.sh: New clean targets. 2382 2383 2008-06-02 16:24 larour 2384 2385 * startup.m: Updated paths to solution scripts. 2386 2387 2008-06-02 16:12 larour 2388 2389 * startup.m: Modified path to Triangle meshing modules. 2390 2391 2008-05-30 11:32 larour 2392 2393 * todo: Additional task on square model. 2394 2395 2008-05-30 11:18 larour 2396 2397 * todo: Added cholesky task. 2398 2399 2008-05-30 10:47 larour 2400 2401 * todo: Todo file. Update as much as needed. 2402 2403 2008-05-29 14:26 seroussi 2404 2405 * startup.m: Comment on lastwarn 2406 2407 2008-05-29 14:07 morlighe 2408 2409 * startup.m: fixed problem with startup's warning message 2410 2411 2008-05-29 12:16 larour 2412 2413 * startup.m: Updated startup.m file for new changes in names of 2414 solution sequences 2415 2416 2008-05-29 11:57 larour 2417 2418 * startup.m: Improved startup file. Added missing Model in the Ice 2419 path. 2420 2421 2008-05-29 11:54 larour 2422 2423 * startup.m: Improved startup file 2424 2425 2008-05-29 11:50 larour 2426 2427 * startup.m: Improved startup file 2428 2429 2008-05-29 11:45 larour 2430 2431 * startup.m: Improved startup file 2432 2433 2008-05-29 11:42 larour 2434 2435 * startup.m: Improved startup file 2436 2437 2008-05-29 10:06 morlighe 2438 2439 * startup.m: [no log message] 2440 2441 2008-05-21 11:08 larour 2442 2443 * archive.sh: New tar creation routine. 2444 2445 2008-05-21 10:53 larour 2446 2447 * startup.m: New shuffling of code architecture. 2448 2449 2008-05-21 10:13 larour 2450 2451 * startup.m: Cleaned up startup file. 2452 2453 2008-04-19 12:33 larour 2454 2455 * startup.m: Working out of tier3 now. 2456 2457 2008-03-05 13:31 larour 2458 2459 * startup.m: Too many changes to explain 2460 2461 2007-12-05 14:48 larour 2462 2463 * Makefile: Not needed for now. 2464 2465 2007-12-05 14:45 larour 2466 2467 * startup.m: Added windows startup to the existing linux startup 2468 matlab script. 2469 2470 2007-12-05 12:12 larour 2471 2472 * startup.m: Cleaned up a little bit. Only two paths to setup: for 2473 Cielo, and for Ice codes. 2474 2475 2007-11-27 12:07 larour 2476 2477 * startup.m: New TriMesh modules, added path. 2478 2479 2007-11-21 18:11 larour 2480 2481 * startup.m: Added MacAyealControlModel to the matlab path. 2482 2483 2007-11-19 15:25 larour 2484 2485 * startup.m: Promoted tier3_ice to tier2_ice. 2486 2487 2007-11-18 16:07 larour 2488 2489 * startup.m: This file should be symbolically linked to the matlab 2490 starting directory. 2491 2492 2007-10-25 09:30 larour 2493 2494 * Makefile: Ice flow modeling 2495 2496 2007-10-25 09:30 larour 2497 2498 * Makefile: Initial revision 2499 3 https://issm.ess.uci.edu:80/trac/issm/timeline -
proj/ice/larour/issm-uci-clean/trunk-jpl/configure.ac
1 AC_INIT(ISSM, [1.0], [Eric Larour <eric.larour@jpl.nasa.gov>])1 AC_INIT(ISSM,4.0,issm@jpl.nasa.gov) 2 2 AM_CONFIG_HEADER(config.h) 3 3 AC_CANONICAL_TARGET 4 4 AM_INIT_AUTOMAKE -
proj/ice/larour/issm-uci-clean/trunk-jpl/doc/issmdoc.m
3 3 %First get ISSM tier: 4 4 ISSM_TIER=issmtier; 5 5 6 disp(sprintf('\n%s%s%s',' The following documentations are available in ',ISSM_TIER,'/doc/')); 7 disp(sprintf('%s',' userguide: how to use ISSM, quick tutorial')); 8 disp(sprintf('%s',' theoryguide: theory behind the ISSM models')); 9 disp(sprintf('%s',' validation: test results of ISSM')); 10 disp(sprintf('\n%s',' Website: a comprehensive documentation is available on http://www.issm.jpl.nasa.gov')); 6 disp(sprintf('\n%s',' A comprehensive documentation is available on http://issm.jpl.nasa.gov')); 11 7 disp(sprintf('\n%s',' Example: how to create a square ice shelf')); 12 8 disp(sprintf('%s',' go to ',ISSM_TIER,'/examples/SquareIceshelf')); 13 9 disp(sprintf('%s',' md=model; %creates a new empty model structure'));
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